ID A0A1J0VHS7_9GAMM Unreviewed; 537 AA.
AC A0A1J0VHS7;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Murein L,D-transpeptidase {ECO:0000313|EMBL:APE31587.1};
GN ORFNames=BOX17_11885 {ECO:0000313|EMBL:APE31587.1};
OS Halomonas aestuarii.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Halomonadaceae; Halomonas.
OX NCBI_TaxID=1897729 {ECO:0000313|EMBL:APE31587.1, ECO:0000313|Proteomes:UP000181985};
RN [1] {ECO:0000313|Proteomes:UP000181985}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hb3 {ECO:0000313|Proteomes:UP000181985};
RA Koh H.-W., Rani S., Park S.-J.;
RT "Halolamina sediminis sp. nov., an extremely halophilic archaeon isolated
RT from solar salt.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; CP018139; APE31587.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J0VHS7; -.
DR KEGG; hsi:BOX17_11885; -.
DR OrthoDB; 9778545at2; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000181985; Chromosome.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR045380; LD_TPept_scaffold_dom.
DR InterPro; IPR002477; Peptidoglycan-bd-like.
DR InterPro; IPR036365; PGBD-like_sf.
DR InterPro; IPR036366; PGBDSf.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR41533:SF2; BLR7131 PROTEIN; 1.
DR PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR Pfam; PF01471; PG_binding_1; 1.
DR Pfam; PF20142; Scaffold; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF47090; PGBD-like; 1.
PE 3: Inferred from homology;
KW Signal {ECO:0000256|SAM:SignalP};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..537
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5012181771"
FT DOMAIN 47..185
FT /note="L,D-transpeptidase scaffold"
FT /evidence="ECO:0000259|Pfam:PF20142"
FT DOMAIN 214..281
FT /note="Peptidoglycan binding-like"
FT /evidence="ECO:0000259|Pfam:PF01471"
FT DOMAIN 310..469
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 537 AA; 60815 MW; FB55D6B761A5CB01 CRC64;
MPSAIGLKPL ILAGVMALSL ATAALAEDAP PPQADSLLER LDEQEGALRD FYAVREGRPA
WQDVATVADF AAALRTLDTD GLNPLDYRPD ALVTAHRQVY AEGSTPADRA RFDLQASRVL
LTALRHLQRG KVDPYRIDPD WEVPIEAPPL DLPAISRAVD AHRFEQAFAA ARPSAPPYER
LRAGLARYRH IERQGGWPML PLRPEPLRPG DLHEDVPLLR ERLAIMGELE VMVADLFAGV
ESRDTDPRRY DERLVEAVKE FQQRHLLEVD GIIGPQTREA LNVPVSRRID QIRVNLERAR
WLLHGLPDSF VLVDIAGYRI SYFRPDGDVW RSRIVVGRPY RRTPSLRSRI TYLTLNPTWT
VPPTILREDV LPGVRRDLGY LWEHDLMVLS PSGQRLDPRE VNWWHPGNVI LRQRSGPQNA
LGRVVLRFPN DHLVYLHDTP AQGLFAREQR AFSSGCIRVQ GVLQLAQYLF DDTGTPAHVA
TLVSEGVTRN ISLERPVPVI LHYWTVDPSE DGRLVFRPDI YERDAALREA LDRPLPR
//