ID A0A1J6IAD5_NICAT Unreviewed; 994 AA.
AC A0A1J6IAD5;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Dexh-box atp-dependent rna helicase dexh10 {ECO:0000313|EMBL:OIT01997.1};
GN Name=HEN2_0 {ECO:0000313|EMBL:OIT01997.1};
GN ORFNames=A4A49_32982 {ECO:0000313|EMBL:OIT01997.1};
OS Nicotiana attenuata (Coyote tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=49451 {ECO:0000313|EMBL:OIT01997.1, ECO:0000313|Proteomes:UP000187609};
RN [1] {ECO:0000313|EMBL:OIT01997.1, ECO:0000313|Proteomes:UP000187609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UT {ECO:0000313|Proteomes:UP000187609};
RC TISSUE=Leaves {ECO:0000313|EMBL:OIT01997.1};
RA Xu S., Brockmoeller T., Gaquerel E., Navarro A., Kuhl H., Gase K., Ling Z.,
RA Zhou W., Kreitzer C., Stanke M., Tang H., Lyons E., Pandey P., Pandey S.P.,
RA Timmermann B., Baldwin I.T.;
RT "The genome of Nicotiana attenuata.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OIT01997.1}.
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DR EMBL; MJEQ01037188; OIT01997.1; -; Genomic_DNA.
DR RefSeq; XP_019247223.1; XM_019391678.1.
DR AlphaFoldDB; A0A1J6IAD5; -.
DR STRING; 49451.A0A1J6IAD5; -.
DR EnsemblPlants; OIT01997; OIT01997; A4A49_32982.
DR GeneID; 109226807; -.
DR Gramene; OIT01997; OIT01997; A4A49_32982.
DR KEGG; nau:109226807; -.
DR OMA; MTCHLGD; -.
DR OrthoDB; 1352at2759; -.
DR Proteomes; UP000187609; Chromosome 6.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF32; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH10; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:OIT01997.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000187609}.
FT DOMAIN 86..242
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 317..518
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 994 AA; 111529 MW; 833FED1A1219F5CB CRC64;
MESSSPTLGK RKLEEEHEAA AASQASALKR RNLAAVRTCV HEVAVPSHYT STNDESLHGT
LSNPIYNGQM AKNYPFKLDP FQEISVACLE RKESVLVSAH TSAGKTAVAE YAIAMSFRDK
QRVIYTSPLK ALSNQKYREL SHEFSDVGLM TGDVTLSPNA SCLVMTTEIL RGMLYRGSEV
LKEVAWVIFD EIHYMKDRER GVVWEESIIF LPPEIKMVFL SATMSNATEF AEWICNIHKQ
PCHVVYTDFR PTPLQHYVFP MGGSGLYLVV DDNEQFREDN FLKLQDTFTK QKLRGSANGK
ASGRIGKGGS ASGSVSEIYK IVKMIMERKF QPVIIFSFSR RECEQHAMSM TKLDFNTEEE
KEAVEQVFRS AVACLSEEDR NLPAIELMLP LLQRGIAVHH SGLLPVIKEL VELLFQEGLI
KALFATETFA MGLNMPAKTV VFTNVKKFDG DSHRYIGSGE YIQMSGRAGR RGKDERGICI
IMIDEQMEMD NLKDMVLGKP APLVSTFRLS YYTILNLMSR SEGQFTAEHV IKNSFHQFQY
EKALPDIGKK VSKLEEEAAT LDASGEAEVA GYHKLKLEIA QFEKKLMAEI TRPERVLYFL
LPGRLVKVRE GGKDWGWGVV VNVVKKPPAA LGSLPAALSA SRGTGYIVDT LLHCSLGSSE
NGSRPKPCPP RPGEKGEMHV VPVQLPLISS LSKLRISVPS DLRPLEARQS ILLAVQELEK
RFPEGLPKLN PVKDMGIEDP EVVDMVNQIE ELEKKLFSHP LHKSQNEHQL KCFQRKAEVN
HEIQQLKSKM RDSQLQKFRD ELRNRSQVLK KLGHIDADGV VQLKGRAACL IDTGDELLVT
ELMFNGTFND LNHHQVAALA SCFIPGDRTT EQILLRDELA KPLRQLQDSA RKIAEIQNEC
KLEVNVDEYV DAAVRPFLMD VIYCWSKGAS FAEVIQMTDI FEGSIIRLAR RLDEFLNQLK
AAAHAVGETD LENKFGAASD SLRRGIMFAN SLYL
//
