ID A0A1J6IWL8_NICAT Unreviewed; 539 AA.
AC A0A1J6IWL8;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:OIT03187.1};
GN ORFNames=A4A49_02431 {ECO:0000313|EMBL:OIT03187.1};
OS Nicotiana attenuata (Coyote tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=49451 {ECO:0000313|EMBL:OIT03187.1, ECO:0000313|Proteomes:UP000187609};
RN [1] {ECO:0000313|EMBL:OIT03187.1, ECO:0000313|Proteomes:UP000187609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UT {ECO:0000313|Proteomes:UP000187609};
RC TISSUE=Leaves {ECO:0000313|EMBL:OIT03187.1};
RA Xu S., Brockmoeller T., Gaquerel E., Navarro A., Kuhl H., Gase K., Ling Z.,
RA Zhou W., Kreitzer C., Stanke M., Tang H., Lyons E., Pandey P., Pandey S.P.,
RA Timmermann B., Baldwin I.T.;
RT "The genome of Nicotiana attenuata.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OIT03187.1}.
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DR EMBL; MJEQ01037187; OIT03187.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J6IWL8; -.
DR STRING; 49451.A0A1J6IWL8; -.
DR EnsemblPlants; OIT03187; OIT03187; A4A49_02431.
DR Gramene; OIT03187; OIT03187; A4A49_02431.
DR OMA; HESHAYT; -.
DR Proteomes; UP000187609; Chromosome 5.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0000245; P:spliceosomal complex assembly; IEA:InterPro.
DR CDD; cd02669; Peptidase_C19M; 1.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR033809; USP39.
DR InterPro; IPR028889; USP_dom.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR001607; Znf_UBP.
DR PANTHER; PTHR21646:SF16; U4_U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 2; 1.
DR PANTHER; PTHR21646; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR Pfam; PF00443; UCH; 1.
DR Pfam; PF02148; zf-UBP; 1.
DR SMART; SM00290; ZnF_UBP; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50235; USP_3; 1.
DR PROSITE; PS50271; ZF_UBP; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Reference proteome {ECO:0000313|Proteomes:UP000187609};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00502}.
FT DOMAIN 128..225
FT /note="UBP-type"
FT /evidence="ECO:0000259|PROSITE:PS50271"
FT DOMAIN 250..539
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 348..370
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 350..370
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 539 AA; 62374 MW; 710F81289540DE36 CRC64;
MCNWITSLLN IKVSKDFGSY LGFPMSGTPP KHKEYLPLVE KMRARLNVWN ANWLNIAGLQ
FAAPPGSAST KLEVFQANFS AELFRPLSPA KSIHSFEYLL FAHNDQKERN RRLDVSQGKK
NLTSEVRRDC PFLDTINRQV LDFDFEKSCS VTDRKFNLYA CLICGKYYQG RGHESHAYTH
SRKAGHHVYI NVQSEKVYCL PDGYEVKDPS LDDICLLLNP RFTLEQVEQL DKKRQWSRAL
DGSNYLPGTV GLNIVDKTDF INVTIQSLMS VTPLRNFFLI PENYQQCESP LVHQFGELTR
KIWHAGNFKG QVNPREFLQA VMDSSEKRFR VDGELEVVKE MHNRPIAERR KSGGNSQING
NGEDGGNEAG NFVSETSRVP FLMLELDLPP PPLFKDFMEK NIIPQVPLFN ILKKIDGETV
TEVVHPRIAR MRFRIKKLPR YLIFHMRRFT KNNFFLEKNP TLVNFPVKNL ELKDYIPLPA
PRQNRKLRSK YDLIANIVHD GKPEEGSYRV FVQQKSEELW YKMQDLHVSE TLPQMVCII
//
