ID A0A1J6J874_NICAT Unreviewed; 331 AA.
AC A0A1J6J874;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Zinc finger ccch domain-containing protein 39 {ECO:0000313|EMBL:OIT03393.1};
GN ORFNames=A4A49_00656 {ECO:0000313|EMBL:OIT03393.1};
OS Nicotiana attenuata (Coyote tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=49451 {ECO:0000313|EMBL:OIT03393.1, ECO:0000313|Proteomes:UP000187609};
RN [1] {ECO:0000313|EMBL:OIT03393.1, ECO:0000313|Proteomes:UP000187609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UT {ECO:0000313|Proteomes:UP000187609};
RC TISSUE=Leaves {ECO:0000313|EMBL:OIT03393.1};
RA Xu S., Brockmoeller T., Gaquerel E., Navarro A., Kuhl H., Gase K., Ling Z.,
RA Zhou W., Kreitzer C., Stanke M., Tang H., Lyons E., Pandey P., Pandey S.P.,
RA Timmermann B., Baldwin I.T.;
RT "The genome of Nicotiana attenuata.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OIT03393.1}.
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DR EMBL; MJEQ01037187; OIT03393.1; -; Genomic_DNA.
DR RefSeq; XP_019245706.1; XM_019390161.1.
DR RefSeq; XP_019245707.1; XM_019390162.1.
DR AlphaFoldDB; A0A1J6J874; -.
DR STRING; 49451.A0A1J6J874; -.
DR EnsemblPlants; OIT03393; OIT03393; A4A49_00656.
DR GeneID; 109225486; -.
DR Gramene; OIT03393; OIT03393; A4A49_00656.
DR KEGG; nau:109225486; -.
DR OMA; HGVEDMR; -.
DR OrthoDB; 200644at2759; -.
DR Proteomes; UP000187609; Chromosome 5.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR GO; GO:0060255; P:regulation of macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 3.
DR InterPro; IPR045877; ZFP36-like.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR12547; CCCH ZINC FINGER/TIS11-RELATED; 1.
DR PANTHER; PTHR12547:SF121; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39; 1.
DR Pfam; PF00642; zf-CCCH; 2.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF90229; CCCH zinc finger; 3.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000187609};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 87..114
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 145..173
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 222..250
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 87..114
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 145..173
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 222..250
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 173..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..200
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 331 AA; 37727 MW; B7DCCC2AE8E2A388 CRC64;
MSYSDPPPPP PPFMPMPFAG GDIGEAWPQS PMNHEFLESH SQFDHVPPFK RLRNSDNNSP
NSANYTPMNS RVNQLNLIGN KGTSHIFFKT RMCAKFLEGT CRNGEHCTFA HGVEDLREPP
PNWQELVREK DRGVVGNWND DQKIIHRMKI CKKFYNGEEC PYGDKCNFLH ERPPKFKTDT
PRQRESSAIS IGTTGNRSDP ELNEISKHGI VDSDAVRMKP IYWKTKMCSK WETTGQCPFR
DRCHFAHGQS ELQVPSGPDL LTNPVPIMPR PFSVPLVELS SANAAVNASI QEEKEDKKIL
KWKLTKKIYR IYADWIDDLV PPHLLASKAE S
//
