ID A0A1J6JBH6_NICAT Unreviewed; 565 AA.
AC A0A1J6JBH6;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|PROSITE:PS50879};
GN ORFNames=A4A49_06431 {ECO:0000313|EMBL:OIT08187.1};
OS Nicotiana attenuata (Coyote tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=49451 {ECO:0000313|EMBL:OIT08187.1, ECO:0000313|Proteomes:UP000187609};
RN [1] {ECO:0000313|EMBL:OIT08187.1, ECO:0000313|Proteomes:UP000187609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UT {ECO:0000313|Proteomes:UP000187609};
RC TISSUE=Leaves {ECO:0000313|EMBL:OIT08187.1};
RA Xu S., Brockmoeller T., Gaquerel E., Navarro A., Kuhl H., Gase K., Ling Z.,
RA Zhou W., Kreitzer C., Stanke M., Tang H., Lyons E., Pandey P., Pandey S.P.,
RA Timmermann B., Baldwin I.T.;
RT "The genome of Nicotiana attenuata.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OIT08187.1}.
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DR EMBL; MJEQ01037183; OIT08187.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J6JBH6; -.
DR EnsemblPlants; OIT08187; OIT08187; A4A49_06431.
DR Gramene; OIT08187; OIT08187; A4A49_06431.
DR Proteomes; UP000187609; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR025558; DUF4283.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47723; OS05G0353850 PROTEIN; 1.
DR PANTHER; PTHR47723:SF14; RNASE H TYPE-1 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF14111; DUF4283; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187609}.
FT DOMAIN 452..565
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT REGION 182..261
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 326..351
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 190..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..261
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 329..351
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 565 AA; 63166 MW; F414DD5D922820D1 CRC64;
MRTIPLKGAV KIGAYNLKNV FIDFDLEEDH KSVYGRSPLI IGGMKMKLQK WTADFKPGVE
TTMAPVWINL PDLRWHFFEW AAFCRIVEPI GILIICDKAT LLKTRPTTAK IKIQIDNAKP
LLKEGHSDLK CGVQHPELRE LATIFENKGN KATILENKIM EVTGGNVRNE MEVDKRANIS
EINKEQTTST MEMENREEEE GWTTVTNSKG KKKGRKNTNK AQSTEVAEEN QNTSKIQKDI
NERSVSSSEE KIQQSMKNAS QAHNLQGIIG TIKPPKDPDG NHILLDFSGK DKDVAMDNIA
IETNSQDDDN GVGDYSHFET DLEEEVEETP FLKEQASLSE EEASKTGKNT MDNMDFETEK
VLTQDQKLIS DVNNLSPREL DEPTISDDVN KLIALPTEEE LKSCILSMDP DSSPGPDGFT
AKIFQTCWSI VASDIVQSFI SIFCGVELRR PTPQFVKLNS DGSCNAGNCG GGGVIRDKDG
CLIFAYSLPL GTGSSNWAEA SALHYGIKWC LSNGLQYITA ESDSKLHVEC VNGRYATPWR
IPNEVEELKE FMVQSRLTLK HCYRE
//
