ID A0A1J6KP50_NICAT Unreviewed; 472 AA.
AC A0A1J6KP50;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Pentatricopeptide repeat-containing protein, mitochondrial {ECO:0000313|EMBL:OIT20961.1};
GN ORFNames=A4A49_36628 {ECO:0000313|EMBL:OIT20961.1};
OS Nicotiana attenuata (Coyote tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=49451 {ECO:0000313|EMBL:OIT20961.1, ECO:0000313|Proteomes:UP000187609};
RN [1] {ECO:0000313|EMBL:OIT20961.1, ECO:0000313|Proteomes:UP000187609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UT {ECO:0000313|Proteomes:UP000187609};
RC TISSUE=Leaves {ECO:0000313|EMBL:OIT20961.1};
RA Xu S., Brockmoeller T., Gaquerel E., Navarro A., Kuhl H., Gase K., Ling Z.,
RA Zhou W., Kreitzer C., Stanke M., Tang H., Lyons E., Pandey P., Pandey S.P.,
RA Timmermann B., Baldwin I.T.;
RT "The genome of Nicotiana attenuata.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OIT20961.1}.
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DR EMBL; MJEQ01004720; OIT20961.1; -; Genomic_DNA.
DR RefSeq; XP_019239509.1; XM_019383964.1.
DR AlphaFoldDB; A0A1J6KP50; -.
DR STRING; 49451.A0A1J6KP50; -.
DR EnsemblPlants; OIT20961; OIT20961; A4A49_36628.
DR GeneID; 109219504; -.
DR Gramene; OIT20961; OIT20961; A4A49_36628.
DR KEGG; nau:109219504; -.
DR OMA; LVNAWCS; -.
DR OrthoDB; 647768at2759; -.
DR Proteomes; UP000187609; Unassembled WGS sequence.
DR GO; GO:0008380; P:RNA splicing; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR044578; BIR6-like.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR47003; OS01G0970900 PROTEIN; 1.
DR PANTHER; PTHR47003:SF11; PPR SUPERFAMILY PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000187609};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 194..228
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 229..263
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 299..333
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 334..368
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 369..403
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 404..438
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 472 AA; 53777 MW; AED7BC243134A0B2 CRC64;
MLSMFARIFL QRTSYSAILT NSTSTFRCLK TITPSVDPDS NPFGGKGSCS RSVPNDDYFA
AIHHISNIVR RDIYMERTLN KMHISSIVNS ELVYRILRSC CQHGIESFRF FNWARTQHPQ
YDPTTVEFEE LLKTLARTAH WETMWKVVQQ MKAQNIPISP SIVSFIIEHY GKRGLIDQAV
ELFNRLKNFN CPHTTEVYNA LLFALCEVKN FQGAYALIRR MIRKGSVPDK KTYSILVNGW
CSAGKMREAQ EFLEEMSRKG FNPPVRGRDL LIDGLLNAGY LESAKGLVRK MTKEGFVPDV
GTFNSLAEAI CKTGEIDFCI DLFNDVCRLG LCPDIETYKI VITAASKVGR IDEAVQILHR
SIEDGQRPFP SLYAPILKAF FRRGQFDDAF SFFSDMKLKG HPPNRPLYTM LIKMCTRGGR
FVEAANYLVE MTELNLLPMS RSFDMVTDGL KNCGKHDLAK RIEQLEISIK GI
//
