ID A0A1J6KSS5_NICAT Unreviewed; 524 AA.
AC A0A1J6KSS5;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Factor of dna methylation 4 {ECO:0000313|EMBL:OIT24743.1};
GN Name=FDM4_1 {ECO:0000313|EMBL:OIT24743.1};
GN ORFNames=A4A49_27626 {ECO:0000313|EMBL:OIT24743.1};
OS Nicotiana attenuata (Coyote tobacco).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=49451 {ECO:0000313|EMBL:OIT24743.1, ECO:0000313|Proteomes:UP000187609};
RN [1] {ECO:0000313|EMBL:OIT24743.1, ECO:0000313|Proteomes:UP000187609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. UT {ECO:0000313|Proteomes:UP000187609};
RC TISSUE=Leaves {ECO:0000313|EMBL:OIT24743.1};
RA Xu S., Brockmoeller T., Gaquerel E., Navarro A., Kuhl H., Gase K., Ling Z.,
RA Zhou W., Kreitzer C., Stanke M., Tang H., Lyons E., Pandey P., Pandey S.P.,
RA Timmermann B., Baldwin I.T.;
RT "The genome of Nicotiana attenuata.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OIT24743.1}.
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DR EMBL; MJEQ01003132; OIT24743.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J6KSS5; -.
DR STRING; 49451.A0A1J6KSS5; -.
DR EnsemblPlants; OIT24743; OIT24743; A4A49_27626.
DR Gramene; OIT24743; OIT24743; A4A49_27626.
DR OMA; QKDEMHR; -.
DR Proteomes; UP000187609; Unassembled WGS sequence.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR Gene3D; 3.30.70.2890; XS domain; 1.
DR InterPro; IPR045177; FDM1-5/IDN2.
DR InterPro; IPR005379; FDM1-5/IDN2_XH.
DR InterPro; IPR005380; XS_domain.
DR InterPro; IPR038588; XS_domain_sf.
DR PANTHER; PTHR21596:SF83; FACTOR OF DNA METHYLATION 4-LIKE; 1.
DR PANTHER; PTHR21596; RIBONUCLEASE P SUBUNIT P38; 1.
DR Pfam; PF03469; XH; 1.
DR Pfam; PF03468; XS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000187609}.
FT DOMAIN 15..125
FT /note="XS"
FT /evidence="ECO:0000259|Pfam:PF03468"
FT DOMAIN 394..522
FT /note="Factor of DNA methylation 1-5/IDN2"
FT /evidence="ECO:0000259|Pfam:PF03469"
FT COILED 158..366
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 524 AA; 60875 MW; E3E8C559BB21304B CRC64;
METELQPAHQ GNDVDEKYVF PWMGIVANLP IEWDGKRYVG KSGSGLRDDL TNKGFNPVRV
HPLWNHRGHS GYAVVEFSNN WDGFAYAIKL EKSFESQHRG KLEYLGSANR ENKLYGWVAK
ADDFKSSGVI GDYLRKNGDL KSISEIQAED KRKNDALVSN LAETIEAKSR RLKEIESKCN
ETSMCLSKVM MQRDEMIQEY NEELQGMAKN ARDQLAKMIK EREKNKSYLE AQRKELELRE
KELVEREALN DNQRQELHSL KQMNERAEME QKRMDESVLK LAEEQKKEKE TLRDKILELQ
TKLDSKQALE LEIERLKGAT QVMRHMGDGQ DVKKKLDEIQ ESLKEKEEEL EDLEALNQAL
VVKERRANVE LQDARKELID GMKQHSSRAL IGVKRMGELD IKRFQEITKK MFVEDADLKA
AELCSIWEAH LRDPKWHPFK VVTTENGPKE DIDDKDERLN RLKHEYGEAA YELVTTALLE
MNESSSSRGI TTELWNYKLE RKATIKEGIS YIVQKLKVSK AKKR
//
