ID A0A1J7GMX7_LUPAN Unreviewed; 463 AA.
AC A0A1J7GMX7;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=TanjilG_21673 {ECO:0000313|EMBL:OIV89458.1};
OS Lupinus angustifolius (Narrow-leaved blue lupine).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC genistoids sensu lato; core genistoids; Genisteae; Lupinus.
OX NCBI_TaxID=3871 {ECO:0000313|EMBL:OIV89458.1, ECO:0000313|Proteomes:UP000188354};
RN [1] {ECO:0000313|EMBL:OIV89458.1, ECO:0000313|Proteomes:UP000188354}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tanjil {ECO:0000313|Proteomes:UP000188354};
RC TISSUE=Whole plant {ECO:0000313|EMBL:OIV89458.1};
RX PubMed=27557478; DOI=10.1111/pbi.12615;
RA Hane J.K., Ming Y., Kamphuis L.G., Nelson M.N., Garg G., Atkins C.A.,
RA Bayer P.E., Bravo A., Bringans S., Cannon S., Edwards D., Foley R.,
RA Gao L.L., Harrison M.J., Huang W., Hurgobin B., Li S., Liu C.W.,
RA McGrath A., Morahan G., Murray J., Weller J., Jian J., Singh K.B.;
RT "A comprehensive draft genome sequence for lupin (Lupinus angustifolius),
RT an emerging health food: insights into plant-microbe interactions and
RT legume evolution.";
RL Plant Biotechnol. J. 15:318-330(2017).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; KV862292; OIV89458.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J7GMX7; -.
DR STRING; 3871.A0A1J7GMX7; -.
DR EnsemblPlants; OIV89458; OIV89458; TanjilG_21673.
DR Gramene; OIV89458; OIV89458; TanjilG_21673.
DR Proteomes; UP000188354; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08556; GDPD; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR044236; GDPD4.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR47449; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD4; 1.
DR PANTHER; PTHR47449:SF2; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD4; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000188354};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 182..201
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 198..447
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT REGION 32..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 75..108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 79..101
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 463 AA; 52176 MW; 54D94A0664438959 CRC64;
MDENSDFPEW EFLQNSDDSL DFSPHLDSPL IKPNHFSLHH HHPDSTSNSE TDPSEVDRNF
DDSYVANQLF PDGEKPFLVK ESSSSSLPSS SSSLSNPENI ESGDDSDCDT KMMMVVDEIK
TTEILLDDVT PAAAGGGFDD SKEGDKNYDE NDNENEYKRR VVAWWKVPFE VLKYWVVRVS
PVPVWSLSVA ATAAFLGLVI LGRRLYKMKR KTQTLKLNLA LDDKMAAYLS ALHSQVDCIE
IDVSRSSDGV LFALHDRDLQ RLSGNTTSKV GHMSSKEIRE LGATRHSVEK FNDESIPTIQ
DALLLTSNSV QQIILDVKVG PPFFEKGLAE DILNIVEKTE CRNCVIWAKS DNLAREVIKI
SSEITVGYIV MREPKTGVRT NLLRMKGAEV VGVYHPLIDE KLMKILHRRN KKVYAWTVDD
EESMQKMLFE NVDAIVTGDP TLLQQLMQNT RTQCLEEGYS LPN
//
