ID A0A1J7ILU8_9PEZI Unreviewed; 897 AA.
AC A0A1J7ILU8;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=Cyclin-like domain-containing protein {ECO:0000259|SMART:SM00385};
GN ORFNames=CONLIGDRAFT_632484 {ECO:0000313|EMBL:OIW28227.1};
OS Coniochaeta ligniaria NRRL 30616.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Coniochaetales; Coniochaetaceae; Coniochaeta.
OX NCBI_TaxID=1408157 {ECO:0000313|EMBL:OIW28227.1, ECO:0000313|Proteomes:UP000182658};
RN [1] {ECO:0000313|EMBL:OIW28227.1, ECO:0000313|Proteomes:UP000182658}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NRRL 30616 {ECO:0000313|EMBL:OIW28227.1,
RC ECO:0000313|Proteomes:UP000182658};
RG DOE Joint Genome Institute;
RA Jimenez D.J., Hector R.E., Riley R., Sun H., Grigoriev I.V.,
RA Van Elsas J.D., Nichols N.N.;
RT "Draft genome sequence of Coniochaeta ligniaria NRRL30616, a
RT lignocellulolytic fungus for bioabatement of inhibitors in plant biomass
RT hydrolysates.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KV875098; OIW28227.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J7ILU8; -.
DR STRING; 1408157.A0A1J7ILU8; -.
DR InParanoid; A0A1J7ILU8; -.
DR OrthoDB; 5483352at2759; -.
DR Proteomes; UP000182658; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR CDD; cd20554; CYCLIN_TFIIIB90_rpt2; 1.
DR Gene3D; 1.10.472.10; Cyclin-like; 2.
DR Gene3D; 1.20.5.650; Single helix bin; 1.
DR InterPro; IPR011665; BRF1_TBP-bd_dom.
DR InterPro; IPR013763; Cyclin-like_dom.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR013150; TFIIB_cyclin.
DR PANTHER; PTHR11618:SF4; TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT; 1.
DR PANTHER; PTHR11618; TRANSCRIPTION INITIATION FACTOR IIB-RELATED; 1.
DR Pfam; PF07741; BRF1; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; Cyclin-like; 2.
PE 4: Predicted;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Reference proteome {ECO:0000313|Proteomes:UP000182658};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 152..234
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
FT DOMAIN 250..334
FT /note="Cyclin-like"
FT /evidence="ECO:0000259|SMART:SM00385"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 363..472
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 525..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 597..691
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 703..752
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 769..897
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 373..403
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 405..432
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 605..622
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 623..637
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 659..691
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 781..800
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 812..826
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 827..854
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 855..897
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 897 AA; 96983 MW; 1874333783D5196D CRC64;
MSAITKPPAV KRPPSAPKGK AVRTRPNAVR QIMEREQRAR EQSAAAAKAA AASAVSGTAP
ISRGNSQCPN KACPNPNVVD GTCQTCGRVA DESNIVSEVQ FGETSSGAAV VQGSYLGADQ
GGVRINGGPA FRRVAGSGAG EARERSLKEA KILMQQYAHR LNVPPSVAET GFRLYRMASM
NNFVQGRRIT NVVAMCLYAA CRKEGIHKVM LIDLADLCKE NVFRLGRNFK AFQQKFPENK
DGPAPPVLED LIYKFASKLE FYEENNKIAL SAVRIAKRMQ ADNMTHGRRP AGICGAAVIM
AARAHSFRRT VREVVFIAKV TEHTIQQRMD EFANVPSAQM TIDEFHTNEF LDEQYDPPGW
YKNTAAWKEK HPGRKRKVQE MHDDDAGSAT PEPTGDKRQR LDATPDPAQP SSSKPSAAPT
ENASTSVPVD PRLLSPSPSP PPSQSQANMR PNTDKDGFVI PPLPGRPTPE IVVTGEERAA
IVSARGGDGE LNMLVEEFGD PDAIPERSTE AAMAAAQGII IPALTGKKGA GSPGKGKGKK
KTAADKGDNL VFDDNWCAEE AALEDDLEGL LHDEQLMSIA VDEVRKEGDA RAATLLEEFA
QEQRVDQEVS TALQHGQSAE QPPPTPSSAP RPAPGEAPTE APAENSISTF YNGQRSKVKD
DPIVTEDEFA DDPEVAHCKL NPQEAKMKEQ IWTNENEDWL RERQKKEHAK KMAAKGPAKK
TRNRNRVARI GEGQASPASS AGEAAAAQIK VRGVSSKLNY HVTTVVDEMF RKGKGEFHRT
NSVYGDTSTV GTNSAAASRA GSVAPSEADS QVEEPATATN SKETTGDTIS DKNKENVDAR
EADQAPAATS KEDDGAVEDG EEEEDYDQTG YDDDQGEYPE EIDPFAENTG GYDEDEW
//
