ID A0A1J8QIC5_9AGAM Unreviewed; 553 AA.
AC A0A1J8QIC5;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=DNA-directed RNA polymerase III subunit RPC3 {ECO:0000256|RuleBase:RU367076};
DE Short=RNA polymerase III subunit C3 {ECO:0000256|RuleBase:RU367076};
GN ORFNames=AZE42_07870 {ECO:0000313|EMBL:OJA11492.1};
OS Rhizopogon vesiculosus.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Boletales; Suillineae; Rhizopogonaceae; Rhizopogon.
OX NCBI_TaxID=180088 {ECO:0000313|EMBL:OJA11492.1, ECO:0000313|Proteomes:UP000183567};
RN [1] {ECO:0000313|EMBL:OJA11492.1, ECO:0000313|Proteomes:UP000183567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AM-OR11-056 {ECO:0000313|EMBL:OJA11492.1,
RC ECO:0000313|Proteomes:UP000183567};
RA Mujic A.B., Kuo A., Tritt A., Lipzen A., Chen C., Johnson J., Sharma A.,
RA Barry K., Grigoriev I.V., Spatafora J.W.;
RT "Comparative genomics of the ectomycorrhizal sister species Rhizopogon
RT vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) reveals a
RT divergence of the mating type B locus.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC Specific core component of RNA polymerase III which synthesizes small
CC RNAs, such as 5S rRNA and tRNAs. {ECO:0000256|ARBA:ARBA00025127,
CC ECO:0000256|RuleBase:RU367076}.
CC -!- SUBUNIT: Component of the RNA polymerase III (Pol III) complex
CC consisting of 17 subunits. {ECO:0000256|RuleBase:RU367076}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU367076}.
CC -!- SIMILARITY: Belongs to the RNA polymerase beta chain family.
CC {ECO:0000256|ARBA:ARBA00006835, ECO:0000256|RuleBase:RU367076}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJA11492.1}.
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DR EMBL; LVVM01005040; OJA11492.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1J8QIC5; -.
DR STRING; 180088.A0A1J8QIC5; -.
DR OrthoDB; 1429291at2759; -.
DR Proteomes; UP000183567; Unassembled WGS sequence.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:UniProtKB-UniRule.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 6.10.140.1450; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 4.
DR InterPro; IPR013197; RNA_pol_III_RPC82-rel_HTH.
DR InterPro; IPR008806; RNA_pol_III_Rpc82_C.
DR InterPro; IPR039748; RPC3.
DR InterPro; IPR024550; TFIIEa/SarR/Rpc3_HTH_dom.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12949:SF0; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3; 1.
DR PANTHER; PTHR12949; RNA POLYMERASE III DNA DIRECTED -RELATED; 1.
DR Pfam; PF08221; HTH_9; 1.
DR Pfam; PF05645; RNA_pol_Rpc82; 1.
DR Pfam; PF02002; TFIIE_alpha; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU367076}; Nucleus {ECO:0000256|RuleBase:RU367076};
KW Reference proteome {ECO:0000313|Proteomes:UP000183567};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU367076}.
FT DOMAIN 9..63
FT /note="RNA polymerase III subunit RPC82-related helix-turn-
FT helix"
FT /evidence="ECO:0000259|Pfam:PF08221"
FT DOMAIN 156..332
FT /note="RNA polymerase III Rpc82 C -terminal"
FT /evidence="ECO:0000259|Pfam:PF05645"
FT DOMAIN 381..473
FT /note="TFIIEalpha/SarR/Rpc3 HTH"
FT /evidence="ECO:0000259|Pfam:PF02002"
FT COILED 198..225
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 553 AA; 62606 MW; 5FC081296C6DE4CC CRC64;
MADADTSRLC VQIVRSHFGP LAANVASALL TRGRLSLAQL IRYTMMKPRS VRAAILVLVQ
HNILWHSNTD EEGEMLEFNT LECLMRLRFG RFVWQAEQLF GPSGAEIVQL ILDHGKLQPP
DIISQLSIYN PKSAELPSHP QLLLMRHPGS SLYSQTLYKL VSGAYLKPST LLSHNSPRDK
RIKYEAEEKA KLTGFPTAKE LREAMETAEA RLKREEEEAE SVGLKRKPKD HRSTKRKAIE
EDMVDDVVYF RVNFDRFNTY IRNKLIETAV GERFNRSAAL VMRATLKSTE AKQKSISDTR
SDPTSTAAIA MLISDDENLS GLVTSTKKPS SASLVKDYLG LMSAIDNPTP AGRASSFINL
SNNKVYVEFG IIGSRLRRHV LEAVARERHG DDGVRIVRLL LDIGKMDEKQ IAKVAMMPNN
VVRPLLAALS SDFLISTQEV PRSADRNPTR TFYLWHVDLH KAYSTLLGHL YKTLYNIGMR
RQAEQEEPTV KAVLEKRERT DVAQDESLLS RMERDVLKEW ETKQEKLTVL EMRVEEAVFI
LRDLDTVGSN EDS
//
