ID A0A1K1NM54_9PROT Unreviewed; 545 AA.
AC A0A1K1NM54;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=SAMN05216414_1245 {ECO:0000313|EMBL:SFW36357.1};
OS Nitrosovibrio sp. Nv17.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Nitrosomonadales;
OC Nitrosomonadaceae; Nitrosovibrio.
OX NCBI_TaxID=1855339 {ECO:0000313|EMBL:SFW36357.1, ECO:0000313|Proteomes:UP000183249};
RN [1] {ECO:0000313|EMBL:SFW36357.1, ECO:0000313|Proteomes:UP000183249}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nv17 {ECO:0000313|EMBL:SFW36357.1,
RC ECO:0000313|Proteomes:UP000183249};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FPIQ01000024; SFW36357.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1K1NM54; -.
DR Proteomes; UP000183249; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF13; 30S RIBOSOMAL PROTEIN S1; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000183249};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:SFW36357.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 4..70
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 88..154
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 175..243
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 260..330
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 347..417
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 434..503
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 545 AA; 60089 MW; 2B36251D06C8BC16 CRC64;
MRVGEVITAE VVRVDYNIVV VNAGLKSESF IPVEEFKNDR GEIEVKPGDF VSVAIEALED
GYGETRLSRD KAKRLTAWHD LEAAMASGAI VCGLVSGKVK GGLTAMINGI RAFLPGSLVD
IRPVKDTTPY ENKEMEFKVI KLDRKRNNVV VSRRAVLEES QGADRQSLLA SLVEGAVVKG
IVKNITDYGA FVDLGGIDGL LHITDLAWRR VKHPSEVISV GDEVTAKVLK FDQEKSRVSL
GMKQLSEDPW VGLSRRYPQH TRLFGKVSNL TDYGAFVEIE QGIEGLVHVS EMDWTNKNVY
PSKVVQLGDE VEVMILEIDE ERRRISLGMK QCKVNPWEDF ALNHQKGDKV RGQIKSITDF
GVFIGLQGGI DGLVHLSDLS WNQAGEEAVR NYKKGDEVEA MVLSIDVERE RISLGIKQLE
GDPFSGFVSV HDKNSVVRGT VKSIDAKGAV IALENDVEGY LRASEVSRDR VEDIRTHLKE
GDAVEAMIIN IDRKNRSINL SIKAKDLHEE SDAIQKVASD NAGNAGTTSL GALLKAKMDV
KNTEQ
//
