ID A0A1L3JBH4_9SPHN Unreviewed; 481 AA.
AC A0A1L3JBH4;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:APG62480.1};
GN ORFNames=LPB140_06415 {ECO:0000313|EMBL:APG62480.1};
OS Sphingorhabdus lutea.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingorhabdus.
OX NCBI_TaxID=1913578 {ECO:0000313|EMBL:APG62480.1, ECO:0000313|Proteomes:UP000242561};
RN [1] {ECO:0000313|EMBL:APG62480.1, ECO:0000313|Proteomes:UP000242561}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LPB0140 {ECO:0000313|EMBL:APG62480.1,
RC ECO:0000313|Proteomes:UP000242561};
RA Kim E., Yi H.;
RT "Sphingorhabdus sp. LPB0140, isolated from marine environment.";
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP018154; APG62480.1; -; Genomic_DNA.
DR RefSeq; WP_072559134.1; NZ_CP018154.1.
DR AlphaFoldDB; A0A1L3JBH4; -.
DR STRING; 1913578.LPB140_06415; -.
DR KEGG; sphl:LPB140_06415; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000242561; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000242561};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 481 AA; 53753 MW; 585143D1AFCCEE02 CRC64;
MAQDKVFAGH VVRRLRRDNG MTQVQMAELL EISASYLNLV ERNQRPLTAS FILKLVEKLH
FDPRSLSGPE PGGGVEAVRR RLGDRLFQDI GVDRAQIVEW LASAPDTAEA FARLYDMKAM
GDAGTAAENI GANNITILVR QEIERWNNHF ADLDNMAEKL ADDLRLQSGD VNGAMVTRLR
EKHQLGVRIL PADILINASW KLDYHARQIQ ISELLDHSSR NFALAASLAR LEAVDEIEAL
VRGAAFDNKV QEQLYRRHLR SYFAAAILMP YGRFVRACES SAYDFTILQR RFSVGFEQLA
HRLTTLNRVG QRGLPFFMLR IDKAGQVSKR FSGASNSPLV AGTARCPLWN VHDAFYSPGS
FCTQYVELED QSRWFTISRT VSRLSPHAPS MQNVGRAESI GDVNARGISA SQFAISLGVE
ASHAGNICYF DQAKMHVHAV GLGCAQCTRA NCAQRAAPPQ NRALIFRENE RAFTPFSFIE
E
//
