ID A0A1L3KJB0_9VIRU Unreviewed; 2661 AA.
AC A0A1L3KJB0;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=SF3 helicase domain-containing protein {ECO:0000259|PROSITE:PS51218};
OS Shahe picorna-like virus 13.
OC Viruses; Riboviria.
OX NCBI_TaxID=1923443 {ECO:0000313|EMBL:APG77385.1};
RN [1] {ECO:0000313|EMBL:APG77385.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SHWC0209c12284 {ECO:0000313|EMBL:APG77371.1}, and SHWC13556
RC {ECO:0000313|EMBL:APG77385.1};
RX PubMed=27880757; DOI=.1038/nature20167;
RA Shi M., Lin X.D., Tian J.H., Chen L.J., Chen X., Li C.X., Qin X.C., Li J.,
RA Cao J.P., Eden J.S., Buchmann J., Wang W., Xu J., Holmes E.C., Zhang Y.Z.;
RT "Redefining the invertebrate RNA virosphere.";
RL Nature 540:539-543(2016).
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DR EMBL; KX883649; APG77371.1; -; Genomic_RNA.
DR EMBL; KX883657; APG77385.1; -; Genomic_RNA.
DR RefSeq; YP_009336810.1; NC_032894.1.
DR GeneID; 30854163; -.
DR KEGG; vg:30854163; -.
DR Proteomes; UP000204078; Genome.
DR GO; GO:0039625; C:viral inner capsid; IEA:UniProtKB-KW.
DR GO; GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:InterPro.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd23169; ps-ssRNAv-Picornavirales; 1.
DR CDD; cd00205; rhv_like; 1.
DR Gene3D; 1.20.960.20; -; 1.
DR Gene3D; 2.60.120.20; -; 3.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR000605; Helicase_SF3_ssDNA/RNA_vir.
DR InterPro; IPR014759; Helicase_SF3_ssRNA_vir.
DR InterPro; IPR009003; Peptidase_S1_PA.
DR InterPro; IPR001676; Picornavirus_capsid.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR033703; Rhv-like.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR029053; Viral_coat.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF00680; RdRP_1; 1.
DR Pfam; PF00073; Rhv; 2.
DR Pfam; PF00910; RNA_helicase; 1.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 2.
DR SUPFAM; SSF50494; Trypsin-like serine proteases; 1.
DR PROSITE; PS51218; SF3_HELICASE_2; 1.
PE 4: Predicted;
KW Capsid protein {ECO:0000256|ARBA:ARBA00022996};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Inner capsid protein {ECO:0000256|ARBA:ARBA00022996};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000204078};
KW Thiol protease {ECO:0000256|ARBA:ARBA00022807};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Virion {ECO:0000256|ARBA:ARBA00022996}.
FT DOMAIN 1368..1539
FT /note="SF3 helicase"
FT /evidence="ECO:0000259|PROSITE:PS51218"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1837..1867
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2661 AA; 295081 MW; 1755C754E3456526 CRC64;
MSNNENSSPA QNSTTSTPIT AMVPETIVPV TSAGSSALGT SISSPAQGLT VNQGTSNLID
PLLGNQIHTE TNNIKLMNES VGISNMNTQT TMDRRSLIAS RDWLTNAPAG KQIFKDQFPY
CLFSSPSFPG AFALGIHEYV NASAVEFTLQ VSASPFSVGI LQMIWSPSHT PDLNKFGAAT
ETFSDRDSTN PDNMIDTYSM LLNIGEGNTA TLTVPLINAL SILRTGTSRI PWSGTTAQTN
FKASNFNFWG NIAVNVFNKL EGITADEDQN LSVKIWARLI EPQTSLLRPY RNPIATNALS
TQGAMMSVAA AVGSALASAA PGLAVGAATT VVGAAAQGIA HKVGKKCTYY TEIGEDPMCI
NMALTNDHRS LLSIGYDIKD FADSTVDLSD SPAETDFRAI CARRSRIFNT PWTASAALDA
PILKFPLHPM TGLSLRTGTV NNIISPSNLA FSALNFAYWR GSLTYTFEVV GNSYTRGALM
VVYQPADDFN TLTDTSLASS YPHAVINIAE TRKFSLRVPY NSQTPWSRTP VVSSLNGGLS
LIALDTLGTL SVMILNPIRT NSASTLTSLD LNVYVHSTDI DFRTPYLNGG IAPTSFIYKN
PIVEFDEADR LELQGNLEVD PLPGAEVFGP GSDPSPTNLM PHSHTDIRQL LTRRVPIASG
NLVSNYSLIT VPLPNIGIRH SSDAAADVRQ YPVSSFYNLL SGCYAWQTGS QVVSMMFGNA
TNRSVNVVAQ VVYNGDENWV PEFSRGFSVV PSTAQAFANV SENDASLLFN VALNTRREIG
IPWYNMVSQL LSGPAYIRSD DDSTAIPTYM PYAFLKIYVQ QAGNLALPFN LTQNVGPNFR
FSEFLGAPRF ILYDPNEISP PAASAAGRVR LPRGLTTFPS TEEDLVLEMD RLRVLTNVQK
CSLCSSKPSS PIAFIKHLQS SHPRDYADIP VPCPFCRKSG LLADWSEHNP ECKMFDRLEC
PVCKIAVTDG LKLNHHLENA HPSLPLSLSK PKKTVSVDFR NKISKIGPAS CSQDLHLQMF
STPHSLVQLG AAAERFTSIL PSENIQSSLD ALTSAATNSS AGLINSLAGI DQATTKLKTT
TEGLSEILPS VQEFFDSGTD SFKKMNDIFT SLQGAFSTVA THTQTEPETL KNRTRIFASA
ARAVRDKDWE PIFTEIFLEM FDRFTLVDPM LMTVGLKAIL ALISPTSRMH SILNATILAK
SSLIVEKMIP DDWKNIFGSV FQSAEDDAIT FGKAILLLFS FGGVVLSGLQ SPISFFKDFA
KNFSFLNLGR SASSLSVLVD SINQLRKRIQ EQFFGRSVWE GYDWLLKNRE LIGGFQADYF
EYLEYPINKI LNSSLLRSRA IKIGETAKLI AANLAKIRVG SNEITSLQKQ ADYFIQLAKQ
SRSVPPGQIR VRPTVVTFQG DSQCGKTFLA STAMPHYINE LMKWPQEPVF MVSSATEDFM
SGYSQQMITM IDDLLQMKEG KDLTGFVNMI GNAPYRVNMA ALEEKGTQFL SEVVIVTMNQ
PHPKVDKFVS HPPAIYNRLY DFYFHVVPKP AFNRGGRLDV AKVRDLGLKC PDDYLDFYRQ
KYVDEERVPP IENALAGEKL SFFEIVSLIV QNIRDEELTV ENHSEETVSS VFPQFPQNFL
PSDWETHFQA VSGTKTRAGR ILKIVQELAK IDGVRLTQQP FERLKDIQYL INEDYSDNIL
MGLNWDVVFG ETCYGRTLYL HESQDAAHLA AQTTPPTKFW HKIWTCQPHI QQYVKFSLGA
AGSGNPVFDF IWKSWRKMSQ TYTSWYYAYP VLMNLLKWYA ISIALNFAIM GVAGVATWWS
TTSLSEDSSD EEPTMTRREE EQDQMASTFF AQESQASWYN SGSPTSGARG KVKVARPSGV
KRGVGKKATQ SDIPPMFPLL KRNTVRLTAC GFSIRALGWK KDILLINRHF MEAIPDGATI
TMERWTPNTA TSRQESFAIK YQVSDTVDFN YEDDQQMDLV MWRTGWKTGT FKDISNHFLR
EDDLDRVTGQ DGYRISDVIT NFSNFAYTES ELPFNAATMT TTKIPFALIA KGSGERGICG
SPWIVTNPCY FGSLGKICGI HAFGGKGIVG AIPITIEALE SVETGFSEPS FQPSLVTMQM
AVDDDADTSL VYHDFHGRLA PSDAFVQPRR TEIQPSPIFG EICDVTHQPA VLSNRDPRLT
SPATFDQDLV KKTDRLSSWF KKESEVDGAV SAIIDEINTL PIKLTPRLLS LDEAVNGVDG
PPFMAETGLE MRNSPGYPWN KKSQGKGKYP YFTERPQIEG ERLKYDLSDP TLIARVNERM
TLAMQGKIPD NSIWLDVMKD ELRPEAKCAS GATRIINAPP LDLMICMNVL FGAFRIFFMD
PDLVGLPLES ALGVDPRASW PAFGLLYKQA MSLFGVDFSK FDSSQLAEFY RQIAKIINAW
YREFQADQTH IDQECLARET VAFEIGHTLH LFGATLYTDD HGLPSGVPGG FTTIFNIMVN
MILARITFMR TGLHVSTYRI HTRNIFLGDD GLHAVLKSED PKINEALLKY NRIELANVAR
EIGMTVTMPD KVSDLTPFDA FEDISFLKSS FVDQVIPGFY LPGMDKKTIG NLLNWYRPRK
NPDQFRTNVQ EALKFAAPHG REYYNELVND LRQNGKMQVL YPGHELTQLL QPFEATFYST
YLPFGLDGVE TTPLFGFPFE I
//
