ID   A0A1L3KKV9_9VIRU        Unreviewed;      1747 AA.
AC   A0A1L3KKV9;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:APG78050.1};
OS   Wenzhou shrimp virus 5.
OC   Viruses; Riboviria.
OX   NCBI_TaxID=1923652 {ECO:0000313|EMBL:APG78050.1};
RN   [1] {ECO:0000313|EMBL:APG78050.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Shrimp14323 {ECO:0000313|EMBL:APG78050.1};
RX   PubMed=27880757; DOI=.1038/nature20167;
RA   Shi M., Lin X.D., Tian J.H., Chen L.J., Chen X., Li C.X., Qin X.C., Li J.,
RA   Cao J.P., Eden J.S., Buchmann J., Wang W., Xu J., Holmes E.C., Zhang Y.Z.;
RT   "Redefining the invertebrate RNA virosphere.";
RL   Nature 540:539-543(2016).
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DR   EMBL; KX883979; APG78050.1; -; Genomic_RNA.
DR   RefSeq; YP_009336682.1; NC_032825.1.
DR   GeneID; 30853972; -.
DR   KEGG; vg:30853972; -.
DR   Proteomes; UP000203016; Genome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR   GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR   CDD; cd23194; Dicistroviridae_RdRp; 1.
DR   Gene3D; 1.20.960.20; -; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 2.40.10.10; Trypsin-like serine proteases; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR004004; Helic/Pol/Pept_Calicivir-typ.
DR   InterPro; IPR000605; Helicase_SF3_ssDNA/RNA_vir.
DR   InterPro; IPR014759; Helicase_SF3_ssRNA_vir.
DR   InterPro; IPR044067; PCV_3C_PRO.
DR   InterPro; IPR024387; Pept_C3G_Picornavir.
DR   InterPro; IPR009003; Peptidase_S1_PA.
DR   InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR001205; RNA-dir_pol_C.
DR   InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR   Pfam; PF12381; Peptidase_C3G; 1.
DR   Pfam; PF00680; RdRP_1; 1.
DR   Pfam; PF00910; RNA_helicase; 1.
DR   PRINTS; PR00918; CALICVIRUSNS.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF50494; Trypsin-like serine proteases; 1.
DR   PROSITE; PS51874; PCV_3C_PRO; 1.
DR   PROSITE; PS50507; RDRP_SSRNA_POS; 1.
DR   PROSITE; PS51218; SF3_HELICASE_2; 1.
PE   4: Predicted;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Protease {ECO:0000256|ARBA:ARBA00022670};
KW   Reference proteome {ECO:0000313|Proteomes:UP000203016};
KW   Thiol protease {ECO:0000256|ARBA:ARBA00022807};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Viral RNA replication {ECO:0000256|ARBA:ARBA00022953}.
FT   DOMAIN          424..603
FT                   /note="SF3 helicase"
FT                   /evidence="ECO:0000259|PROSITE:PS51218"
FT   DOMAIN          988..1206
FT                   /note="Peptidase C3"
FT                   /evidence="ECO:0000259|PROSITE:PS51874"
FT   DOMAIN          1490..1618
FT                   /note="RdRp catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50507"
SQ   SEQUENCE   1747 AA;  196958 MW;  60A005E6FD0F5DDD CRC64;
     MQSFTFNTIF AKNQTTKMTT ENAMLRYKVR SGQLNTLNLG KIRKMKGRVL KLSNELEKNP
     ITFKETTCIE WTIGKITRRI YLNVRPTLTQ ILDTTFRYKQ VEDLHCFYDT DKTYRPHYPR
     ESWIRGMTPI ADAQGIFDGM GDIFFPSIKS ASEHVSEVSQ TISNTIKEMK EWCKTPEAPT
     KIASTLLFIV NQIIMIRNNI SSTTILQLLL SILMYTGFSF KKAIKSIYQL VNSLFEDSPG
     DLVTAMADVD ESFSLEDEDT EAENQMGLDA LTPFLKTLSD NTDLVCGAIV TMITSVCALP
     FVPTNIKSIV GAVKDAGLMA RGLTSISAWV KTIITAIQEV YYKSIHGCTK SEYDLMQLVP
     QFHNLMKDTY TLLSVPVDKF NNSKELCEIV KGMYMEFQGI NQQIVRHGGA LSAEMKYAFS
     KLERQFLPLY EQVKLSPLFN NVSRAKPLAT WIYGKPGVGK SNLVNMMAAL CAKKLYPKKT
     FNGENSVMWS RRVENEYHDG YAHQPFVQFD DCLQIIDTSV KPNPELMEII YMVNDAPYQL
     HMSDIKEKKT TYFDSDHLVA SSNQKIPTAV SIHDVGAFRR RFTFAIEVKV APQYGKPHMD
     KDQNPYFMVD ETKVASALDT QIYQIHHYDL NTGKPILING MPKVQTFDQF IDEYTATFNM
     MKDRRKDQRQ AIYATLGTEI KEDNDLEIVG HYADTHSGAI MEETTATDPD IDIVTKTVHP
     NDIPAEIPTT VQEIDLSDRI VLTLQKLDQE TTKDLNDEED VDHFEEVPLG ESKLVNDTRE
     VFKKKIGKMP GLFSRAWERM KSMYDKIKGI FKITGKKLLI MAGALATLVA TVFLFKPREC
     ALKGEVVDNF NFFARVCGSG CENCEYIKST LGSSINFGLG QEAKIQLATW NLRAAEIMAR
     KDTNWAKCVQ YWTNFLNDCN DTMQLAEVAT AQSRRLTSRR RSAARPEAYG RTASYSARPE
     AYGRTSSAPA IAEAYGRAGE VVAEVQAGAC FDYQSISAAS EQYVRILFRN SASMIADGMR
     VGVLFLTGRT MLCNHHAWAA AERRGQFQLR NPGAIESTTI KIKECRYERV NRGGEYDQDL
     MMVELPVHVP MRPDIMSKIV KGAHQGGLEE RSATLVGFNR ISGLETLSEK PINDLSVTDI
     KTKSQDGQVH TIRKGYAYTA VTRAGDCGSL LFTNSTLAEG KLIGFHSAGI PKDGVGFSEA
     LERGTLEATM SKLQVKKCTA VVGETQGMKK LASWHDLGDV IHHGDSEFVP QQPTHHEHKP
     SILSNVLAEP KAKLAHLKPV KVGDDIIDPL KKGLAKVANT PGRLDEKLLD LAVTDVKRTL
     NNTMDEPHYG VISYEEAITG VEGDAYISPV KRSTAPGEPW KSMKKTTLPG KKEWLNVIVD
     GQATDEYRVD EPTLKAAVEH RINEARKGVR VPALYTATLK DERRPAEKVD AIKTRVFAAA
     PQDYVLAVRM YFADFVAAIM DARIHDEVAV GIDHRKEWPT LANYLLGYGD NFIAGDFSNF
     DGSLLSEVMW KICEIVNEWY GDSEENQLIR EILFEDIASA YVNCRGHVVQ WTHSQPSGNP
     LTVIVNSVFQ MIMFRYVYLW LKAEQGLPIV CDFRKNVRMV TYGDDGMLSV RERIVEWFNQ
     ETITQAFAKC GLTYTDEAKT GKVYKTRPLS EISFLKRSFA QVDGIWMGAL DRDVIYEMCL
     WTRPKYETLQ CQENCAEALK EAVAHGEEFY ETFADQLDQA IYRTGNKLDV PIYTFGEMIE
     ELYASYY
//