ID A0A1L3KNV1_9VIRU Unreviewed; 2904 AA.
AC A0A1L3KNV1;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:APG78975.1};
OS Beihai paphia shell virus 4.
OC Viruses; Riboviria.
OX NCBI_TaxID=1922499 {ECO:0000313|EMBL:APG78975.1};
RN [1] {ECO:0000313|EMBL:APG78975.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BWBFG40859 {ECO:0000313|EMBL:APG78975.1};
RX PubMed=27880757; DOI=.1038/nature20167;
RA Shi M., Lin X.D., Tian J.H., Chen L.J., Chen X., Li C.X., Qin X.C., Li J.,
RA Cao J.P., Eden J.S., Buchmann J., Wang W., Xu J., Holmes E.C., Zhang Y.Z.;
RT "Redefining the invertebrate RNA virosphere.";
RL Nature 540:539-543(2016).
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DR EMBL; KX884532; APG78975.1; -; Genomic_RNA.
DR RefSeq; YP_009333344.1; NC_032495.1.
DR GeneID; 30745608; -.
DR KEGG; vg:30745608; -.
DR Proteomes; UP000204191; Genome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:InterPro.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd23169; ps-ssRNAv-Picornavirales; 1.
DR CDD; cd00205; rhv_like; 1.
DR Gene3D; 2.60.120.20; -; 3.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR000605; Helicase_SF3_ssDNA/RNA_vir.
DR InterPro; IPR014759; Helicase_SF3_ssRNA_vir.
DR InterPro; IPR044067; PCV_3C_PRO.
DR InterPro; IPR009003; Peptidase_S1_PA.
DR InterPro; IPR001676; Picornavirus_capsid.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR033703; Rhv-like.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00680; RdRP_1; 1.
DR Pfam; PF00073; Rhv; 1.
DR Pfam; PF00910; RNA_helicase; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 2.
DR SUPFAM; SSF50494; Trypsin-like serine proteases; 1.
DR PROSITE; PS51874; PCV_3C_PRO; 1.
DR PROSITE; PS51218; SF3_HELICASE_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022806};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Protease {ECO:0000256|ARBA:ARBA00022670};
KW Reference proteome {ECO:0000313|Proteomes:UP000204191};
KW Thiol protease {ECO:0000256|ARBA:ARBA00022807};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1311..1340
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1352..1372
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1384..1403
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 1978..1998
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1526..1694
FT /note="SF3 helicase"
FT /evidence="ECO:0000259|PROSITE:PS51218"
FT DOMAIN 2128..2342
FT /note="Peptidase C3"
FT /evidence="ECO:0000259|PROSITE:PS51874"
FT REGION 1..37
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1785..1814
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2098..2128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2904 AA; 327686 MW; 34E0B8EEBF293B1F CRC64;
MNSNTKNNLY TPTPTQTSQT DTGDVSSPAD GLIQDSGTSH IVDPLLTTQE QVPDVEITKE
FSSMGIANMD SSNVMQRKSL ISTFNWTSSQ STSGFIKEMT LPHDLVKSPG FPGRNALDFH
EYFGARRLRF YIMVSCPPFA RGAIQVIWIP TIGNNLANPS LGSSVNEALS SIDPDSMIDT
TSVIINVGEG NAATFTVPIT NAIETLRMPL PDVPSRIDDP IPDYERFHQW GKLFVKVFNK
LDGVADDDKF VNVNIYAELE DPQVSLLRNS IPLETQGGVL GTMSAAAITG MTAGAAETII
EKVGTNCTEF AISHDEFTLN AISTGDARPV ETLAFVPEDM CTLNNNFSEQ PDEMNLINTI
NKRSRIDVIS WADHATQNTV LSNQSLHPLM GITLHGQTQD DALLKMSNLA ATASMFTYWR
GSISLTIEVV GNSYLRGSFL AVYVPQGKDL PTDYMELTAL PYVSLNLEET RTVVLNIPYN
QITDWSNVPL IEIEKTQPIV WKTHVKQTLG SVGIIVQNPL RATNTETIGP VYVNVYVHSK
DMQFRVPVSN PSLSPVLRTI FPEERNLRTE GDSASAAISS EKGATEIPIF GMGSDPGPTN
MMTNDHMDIR QLCTRREHVL TVKRDQVVDP YAKVSLPIPL VARKEFKALF NYPVATPFNM
LASRFAWMTG SHIISILQDG TSIGSVSAVF RATFNNEYDF RSVYSRNIKV EQSSYDEYIN
ALASDSALIT QRSVAPRTEV QIPWYTIWKN LPSTMMYMHE LFSPGASEPA FQAYAVLEIY
LHFSEYTENV SCAIFQNVGP GFTFSQFLGT PYYALNTALP SVRRILKQEP YTEELKEVLK
NQKKRQRPDN LFKTQGKNEP REYIKFYMAV GYQHLNTFAK EIKEVIADIG SGYALMVVSK
KKPIGFEQLT DKNKLPYLEL KTKWNGFAFL SETMMNTRPW DFAKTCAVLQ KILPEKQLII
RGETAWIVAD HTPAPSNEVV QALWWDKCGC IIEDPEVTCE CVPAQYQSKI PSAGFKPKIL
NMVECPMTPC SIVCTSFEGM ISHVNNSHQN EYDMCCLMEC PFCGHKGPIF NWPSHNEACP
SLNFGPCKCG EKCKSYSKLI RHHKYCHSDF SHTTTRSSGS SRIVTMPRNP RKRFLKTQGD
EEDLHNMAAA IGNVPSLADF KIDDSPKEPT SLLGKTKATV DNFGKMAKEM PTEEVRSAAS
SVKHAASKLK ELPDEIRKIG KVVNKMSSKF EGTNEHLKET LDSFKQSSNK INEAVGDWQT
MIKGLIDSMK KTFRLEKKGN DKLTTGVLSR IIRACYRCNE MNSSIPLLED LFFYLLDVIP
NFLAQTALVT VLKIVLTFFA KTSMIHQTIN SAIVALGTEA ALGVVHGIAK YFTQSESDSS
AGGLIKGIII IIGFIFSVGA GLVSPLKFVQ KFMSNFDLDK LGRTGAGFTT IVKSITDVFT
WIQKKFMRTD LQEAHHFFIK EKKKVNDFIT RVHELKALPH TKVMTDFKVR QDWIYLHDDA
ALIQRQIAYL EKRDAAMSEL YKLTELVIAN SLLAKKAPAK AIRSRPPVLT FIGRPQCGKS
TLTSGIVPKL IYKMMDWKDY KPPYVYSAGD KFFSNYNADK ILVFDDYCQS KNEEQFSIFT
TLISDVPAQV PMADLVDKGT LFNTNAVLMT MNADPPKIDK YVFEPNALYA RMYENAYHVE
ARAQYADQYG KLDYERLVSL GIDHDPDMYL DFYPIRWSLA AGRVPASGVD PETKTTFRSL
MKDYVEKIKN SEQRSEIASK NMRSDVGQKL NMDEFTNAQP VTLPVYTPSQ NAQHASQPST
RSRSRGNRNL RTQGFSSFGK TEIKRNELRY ARDTIQDVLD GSTVRNPVEA VATFVKYEEY
NDEGLFFLYP RLEEFVFKTN EMNFPKVLPF SKDLETRLLM IKSENFGYDN WVTDLIIHYG
WKMFADGSQI EFWTPEESLK GSDEYVQNDD DSPAESMFKR VLKSAYKAIK KFLTWKKVVW
FGLAGVGAVI CWLEFAAIQA AARFGWHMLK GFLYGIPAEE NIGCVDRETK QKIVGYDREN
EEYQLADGTK KHGAPKWRPT PYIPSSDELK QIYANNFGIR PRFVQDPEPD LEQTQGSFYN
KGQPTDNYRP VNRAQPPKVA PRNVPKTEGG ESLGMIPAIR KNIGIVKYNE RGDFVRVLGI
KNKVFVMSLH QLDRLMNKTV KIVRPGLDQA VEYSFPVTEE NVRRIKDNND LTIDLAFVDV
GFTGPNFKDI IRHILPNKDL YRLHDQDGMR YVMHPDNMIE ANPVQRAQLE KEVPVLDDHQ
GEILFPLVVT ASGRSSPGHC GSPIVMMNPK IFGDTGKISG IHSFGGAQTG FTPLIKETCE
AVIESFTTPV FDGEYPDSTP LVSKYNYYTD FSVIEDGQYL SRKTEIHKSP MHGKVFPVTH
EPAVLSPTDS RLDDEKRETF TEDLIGKTNK PVGWFKNHDE VNNAVQDMID TLTDNEIISQ
RVDARLLTYD EVINGSWTNE WTKELGLVMA TSAGFPWNKK PGKGKSAYFD EHTDMISGLI
TRTFKEGTGL MERIEYRLKL AKEGKIPSDS VYLDCMKSEL RPKAKIKAGK TRIINAPPLD
LMVLFGVYLG AFREFFMDPR NVGENIESAL GVDPKIFFPK FALHFRNAIG IFGVDYSAYD
STIPAECYKI QAKVINAWYR KYNTTRTPEE LDQDCKVREV FFAEVANTQH LYGNYLYRDY
HGLPSGVPGG FTTICNILTN MFLSRVAFQR TGLPMALFRK YVRAVFMGDD NIQLLLRSGI
PKIDEKLKLY NRVTLADVAA EINMKVTMPD KSENLTPFDN FRDVSFLKCR WGDCVIPGLY
LPLMDWETIG NLINWYRPES NKYQFEVNVL EALKFAAAYG RTDYNDLRAR LIHAGVEKHI
QAPLREVLPT FDEIFYETYA DESQ
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