ID A0A1L8ZAM9_BORBI Unreviewed; 482 AA.
AC A0A1L8ZAM9;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945};
GN Name=nusA {ECO:0000256|HAMAP-Rule:MF_00945};
GN ORFNames=ER70_06490 {ECO:0000313|EMBL:OJH14809.1};
OS Borrelia bissettiae (Borreliella bissettiae).
OC Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae;
OC Borreliella.
OX NCBI_TaxID=64897 {ECO:0000313|EMBL:OJH14809.1, ECO:0000313|Proteomes:UP000183624};
RN [1] {ECO:0000313|EMBL:OJH14809.1, ECO:0000313|Proteomes:UP000183624}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CO275 {ECO:0000313|EMBL:OJH14809.1,
RC ECO:0000313|Proteomes:UP000183624};
RX PubMed=26419825; DOI=10.1099/mic.0.000192;
RA Leydet B.F.Jr., Liang F.T.;
RT "Similarities in murine infection and immune response to Borrelia bissettii
RT and Borrelia burgdorferi sensu stricto.";
RL Microbiology 161:2352-2360(2015).
CC -!- FUNCTION: Participates in both transcription termination and
CC antitermination. {ECO:0000256|HAMAP-Rule:MF_00945}.
CC -!- SUBUNIT: Monomer. Binds directly to the core enzyme of the DNA-
CC dependent RNA polymerase and to nascent RNA. {ECO:0000256|HAMAP-
CC Rule:MF_00945}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00945}.
CC -!- SIMILARITY: Belongs to the NusA family. {ECO:0000256|HAMAP-
CC Rule:MF_00945}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJH14809.1}.
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DR EMBL; JNBW01000321; OJH14809.1; -; Genomic_DNA.
DR RefSeq; WP_071983688.1; NZ_JNBW01000321.1.
DR AlphaFoldDB; A0A1L8ZAM9; -.
DR OrthoDB; 9807233at2; -.
DR Proteomes; UP000183624; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:UniProtKB-UniRule.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-UniRule.
DR CDD; cd22529; KH-II_NusA_rpt2; 1.
DR CDD; cd04455; S1_NusA; 1.
DR Gene3D; 3.30.300.20; -; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.30.1480.10; NusA, N-terminal domain; 1.
DR HAMAP; MF_00945_B; NusA_B; 1.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR025249; KH_dom_NusA-like.
DR InterPro; IPR009019; KH_sf_prok-type.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR030842; NusA_bac.
DR InterPro; IPR036555; NusA_N_sf.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR013735; TF_NusA_N.
DR InterPro; IPR010213; Tscrpt_termination_fac_NusA.
DR NCBIfam; TIGR01953; NusA; 1.
DR PANTHER; PTHR22648; TRANSCRIPTION TERMINATION FACTOR NUSA; 1.
DR PANTHER; PTHR22648:SF0; TRANSCRIPTION TERMINATION_ANTITERMINATION PROTEIN NUSA; 1.
DR Pfam; PF13184; KH_5; 1.
DR Pfam; PF08529; NusA_N; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00322; KH; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF54814; Prokaryotic type KH domain (KH-domain type II); 2.
DR SUPFAM; SSF69705; Transcription factor NusA, N-terminal domain; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00945};
KW Elongation factor {ECO:0000313|EMBL:OJH14809.1};
KW Protein biosynthesis {ECO:0000313|EMBL:OJH14809.1};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_00945};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00945};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814,
KW ECO:0000256|HAMAP-Rule:MF_00945};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW Rule:MF_00945};
KW Transcription termination {ECO:0000256|ARBA:ARBA00022472,
KW ECO:0000256|HAMAP-Rule:MF_00945}.
FT DOMAIN 133..197
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 482 AA; 54875 MW; 09E92717348E3A31 CRC64;
MIKGTGHMIV NIANDRSMSI DSIRKTIKES VLIAYKKYFG SNENAFIKFD DDTGDLAVYA
KKKIVKEVKD SLLEILEKDI SKENLVEDGY AYIEINPKVF DRLSIQVAKQ RTKNDLQGIE
DNEILSEFKS KLNKVVIGYV QQNRNGDLYV NLGNTDGIIP KKYQSPREVY NINDKIRVLV
YNVKKGKNGI EVILSRTHPK FIEELLALEI PEIEEGIIKI HKIVRDPGYR IKVAVYSEKE
EIDPVGPCIG QKGVRIQSII KELEGEKIDI IPYSKDIKEF IKDSLTPSKI EHVYILDEDL
HKALVVVSDD QLSLAIGKMG QNVRLANRLL DWAIDVKTSS QFAEMKANSE FKQETLEMFD
KVMQDVVEEE QFEEISKISD LKLLDSFVIS NLSKEGLDDI NNFLQADEGM LFNLGVSYEK
QEEINKILKE GMIIIANDND ESIEKIEEDE ELLCPECGVV INENMTSCPG CKIGLSFEFE
EE
//
