ID A0A1L9NVD9_9RHOB Unreviewed; 557 AA.
AC A0A1L9NVD9;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN Name=rpsA {ECO:0000313|EMBL:OJI93247.1};
GN ORFNames=PFRI_25060 {ECO:0000313|EMBL:OJI93247.1};
OS Planktotalea frisia.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Planktotalea.
OX NCBI_TaxID=696762 {ECO:0000313|EMBL:OJI93247.1, ECO:0000313|Proteomes:UP000184514};
RN [1] {ECO:0000313|EMBL:OJI93247.1, ECO:0000313|Proteomes:UP000184514}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SH6-1 {ECO:0000313|EMBL:OJI93247.1,
RC ECO:0000313|Proteomes:UP000184514};
RA Poehlein A., Bakenhus I., Voget S., Brinkhoff T., Simon M.;
RT "Genome sequence of Planktotalea frisia SH6-1.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJI93247.1}.
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DR EMBL; MLCB01000150; OJI93247.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1L9NVD9; -.
DR STRING; 696762.PFRI_25060; -.
DR Proteomes; UP000184514; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000184514};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:OJI93247.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 24..90
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 108..174
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 195..263
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 280..350
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 367..437
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 454..522
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 557 AA; 61244 MW; 2E6E3F5C00F0512A CRC64;
MANLMDEFEA LLTESFEMDT PDEGTVVKGK VIAIEAGQAI IDVGYKMEGR VDIKEFANPG
EAPEIAVGDE VEVFLRSAEN SRGEAVISRE MARREEAWDR LEKAYADEER VEGAIFGRVK
GGFTVDLGGA VAFLPGSQVD VRPVRDAGPL MGMKQPFQIL KMDRRRGNIV VSRRAILEES
RAEQRAEVIG NLTEGQAVDG VVKNITEYGA FVDLGGVDGL LHVTDMAWRR VNHPSEILTI
GETVKVQVIK INKETHRISL GMKQLQEDPW DLVAGKYPLE STHTGRVTNI TDYGAFVELE
PGVEGLVHVS EMSWTKKNVH PGKIVSTSQE VEVMVLEIDG TKRRVSLGLK QTQRNPWEVF
AEQFPEGTEV EGEVKNITEF GLFIGLEGDI DGMVHLSDLS WDERGEEAIQ SYHKNDIVQA
VVSEVDVEKE RISLSVKALG GDKFAEAVGG VKRGSIVTVT VTAIEEGGVE VEYEGMKSFI
RRSDLSRDRA EQRPERFSVG DKVDVRITNV DAKTRRLGVS VKAREIAEEK EAVEQYGSSD
SGASLGDILG AALKSDD
//