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Database: UniProt
Entry: A0A1L9NYD3_9RHOB
LinkDB: A0A1L9NYD3_9RHOB
Original site: A0A1L9NYD3_9RHOB 
ID   A0A1L9NYD3_9RHOB        Unreviewed;       555 AA.
AC   A0A1L9NYD3;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   SubName: Full=Ribonuclease J 1 {ECO:0000313|EMBL:OJI94286.1};
DE            EC=3.1.-.- {ECO:0000313|EMBL:OJI94286.1};
GN   ORFNames=PFRI_15220 {ECO:0000313|EMBL:OJI94286.1};
OS   Planktotalea frisia.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Planktotalea.
OX   NCBI_TaxID=696762 {ECO:0000313|EMBL:OJI94286.1, ECO:0000313|Proteomes:UP000184514};
RN   [1] {ECO:0000313|EMBL:OJI94286.1, ECO:0000313|Proteomes:UP000184514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SH6-1 {ECO:0000313|EMBL:OJI94286.1,
RC   ECO:0000313|Proteomes:UP000184514};
RA   Poehlein A., Bakenhus I., Voget S., Brinkhoff T., Simon M.;
RT   "Genome sequence of Planktotalea frisia SH6-1.";
RL   Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OJI94286.1}.
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DR   EMBL; MLCB01000111; OJI94286.1; -; Genomic_DNA.
DR   RefSeq; WP_072630112.1; NZ_QKZM01000025.1.
DR   AlphaFoldDB; A0A1L9NYD3; -.
DR   STRING; 696762.PFRI_15220; -.
DR   OrthoDB; 9770211at2; -.
DR   Proteomes; UP000184514; Unassembled WGS sequence.
DR   GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   CDD; cd07714; RNaseJ_MBL-fold; 1.
DR   Gene3D; 3.10.20.580; -; 1.
DR   Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR   Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR   InterPro; IPR001279; Metallo-B-lactamas.
DR   InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR   InterPro; IPR011108; RMMBL.
DR   InterPro; IPR042173; RNase_J_2.
DR   InterPro; IPR041636; RNase_J_C.
DR   InterPro; IPR001587; RNase_J_CS.
DR   PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR   PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR   Pfam; PF00753; Lactamase_B; 1.
DR   Pfam; PF07521; RMMBL; 1.
DR   Pfam; PF17770; RNase_J_C; 1.
DR   SMART; SM00849; Lactamase_B; 1.
DR   SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
DR   PROSITE; PS01292; UPF0036; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000313|EMBL:OJI94286.1};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Reference proteome {ECO:0000313|Proteomes:UP000184514};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          18..218
FT                   /note="Metallo-beta-lactamase"
FT                   /evidence="ECO:0000259|SMART:SM00849"
SQ   SEQUENCE   555 AA;  60598 MW;  57E68E01B0505C73 CRC64;
     MSAERLIYLP LGGAGEIGMN AYVYGYGKPG KEKLILVDIG VTFPDMDGTP GVDLILPDIT
     WLKERRNDLE AIFITHAHED HVGAIGHFYE QLRVPIYTRA FTANIARRKL DEYGVEAKAV
     TTVSPWPEVV KAGPFSVGFL PISHSIPESS GLVIDSPDGR VLHTGDFKID ETPLVGEPFD
     EKLWREVSKD GVKALVCDST NVFSLNEGRS EITVGPEIEK LISDQPGMVV ATTFASNVAR
     VKTLAEAGVR AGRSVVLLGR AMRRMVEASI ETGVLKDFPT CISSEDAATL PRENVMLLVT
     GSQGERRAAS AQLARGKYQG LTLKEGDTFL FSSKTIPGNE RGVIYIINQL SEKGVDVIDD
     SSGLYHVSGH ANRPDLEKMH EITQPQMLIP MHGEHRHLRT HVKIAEAKGL SGIVAVNGMM
     IDLSGNKPKV ADYIETGRTY LDGSVQVGAL DGVVRDRMRM ALNGHITVTL ILDENDELLG
     DPWCELMGLA DQGKSRAPLV DVVEEDLSQL IGRSNGKTMR DDKKLEEAIK RCVRQSCNAE
     IGKKPEVTIV VSRLS
//
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