ID A0A1L9QY76_9CYAN Unreviewed; 716 AA.
AC A0A1L9QY76;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=RNA-binding transcriptional accessory protein {ECO:0000313|EMBL:OJJ27623.1};
GN ORFNames=BI308_01280 {ECO:0000313|EMBL:OJJ27623.1};
OS Roseofilum reptotaenium AO1-A.
OC Bacteria; Cyanobacteriota; Cyanophyceae; Desertifilales; Desertifilaceae;
OC Roseofilum.
OX NCBI_TaxID=1925591 {ECO:0000313|EMBL:OJJ27623.1, ECO:0000313|Proteomes:UP000183940};
RN [1] {ECO:0000313|EMBL:OJJ27623.1, ECO:0000313|Proteomes:UP000183940}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AO1-A {ECO:0000313|EMBL:OJJ27623.1};
RA Buerger P., Wood-Charlson E.M., Weynberg K.D., Willis B., Van Oppen M.J.;
RT "CRISPR-Cas defence system in Roseofilum reptotaenium: evidence of a
RT bacteriophage-cyanobacterium arms race in the coral black band disease.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJJ27623.1}.
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DR EMBL; MLAW01000001; OJJ27623.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1L9QY76; -.
DR STRING; 1925591.BI308_01280; -.
DR Proteomes; UP000183940; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000183940}.
FT DOMAIN 646..715
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 716 AA; 80391 MW; 85D2CCDC941BB48C CRC64;
MLQIPQQIAQ ELELNLSQVE NVLQLLQEGA TIPFIARYRK ERTGSLDEVQ LREIADSSVY
LSELEARKKT ILESIESQGK LTEDLKGKIE NCQQKMELED LYLPYKPKRR TRATIAKEKG
LEPLAQLLQD LNTSQGSVSS LEELAQPYLN SEKGVETVEE ALKGASDIIA EQIAETATLR
TQVREQMIKT GAFVSQIKKD YPEGTTKYEM YRNYSAPVSK MAAHNLLALF RGEEEKVLKL
DLDGDRDKIL ENLESQILRT RNRALRPWFQ EAIEDSFNRL MKPSLTSDIR AECKLAADIE
SIQTFETNLR ELLLSPPAGM KPTLAIDPGF RTGCKVAVLD ETAKFLEYQA IFPHQGERQK
QEAAKVMIRL IEKYNIELIA IGNGTASRET DQFVTDVLKT LERKPIKVMV NESGASIYSA
SDLAREEFPD LDVTVRGAIS IGRRLQDPLA ELVKLDPKSI GVGQYQHDVN QKLLKKQLDE
TVESCVNYVG VDLNTASIQL LSFVSGITPT IAKNVVKFRD ENGAFKNRRQ LLKVPKLGPK
AFEQAAGFLR IREGDNPLDN TAVHPESYGI VQQMVKDLKL PLAQISEIAD RVGKIDLQKY
RTEAIGLPTL KDIINELQKP GRDPRAKFEY ATFREGINEI TDLKEGMILE GVVSNVVNFG
AFVDIGVHQD GLIHISQMAD HFVSDPKDIV KVGQVVKVRV LEVNEQLKRI GLSLRV
//
