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Database: UniProt
Entry: A0A1M3DFG3_9SPHN
LinkDB: A0A1M3DFG3_9SPHN
Original site: A0A1M3DFG3_9SPHN 
ID   A0A1M3DFG3_9SPHN        Unreviewed;       194 AA.
AC   A0A1M3DFG3;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   24-JAN-2024, entry version 16.
DE   RecName: Full=Ribosome hibernation promoting factor {ECO:0000256|ARBA:ARBA00041148, ECO:0000256|HAMAP-Rule:MF_00839};
DE            Short=HPF {ECO:0000256|HAMAP-Rule:MF_00839};
GN   Name=hpf {ECO:0000256|HAMAP-Rule:MF_00839};
GN   ORFNames=BGO24_08500 {ECO:0000313|EMBL:OJV33517.1};
OS   Sphingomonas sp. 67-36.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingomonas.
OX   NCBI_TaxID=1895849 {ECO:0000313|EMBL:OJV33517.1, ECO:0000313|Proteomes:UP000183964};
RN   [1] {ECO:0000313|EMBL:OJV33517.1, ECO:0000313|Proteomes:UP000183964}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=67-36 {ECO:0000313|EMBL:OJV33517.1};
RA   Kantor R.S., Huddy R.J., Iyer R., Thomas B.C., Brown C.T., Anantharaman K.,
RA   Tringe S., Hettich R.L., Harrison S.T., Banfield J.F.;
RT   "Genome-resolved meta-omics ties microbial dynamics to process performance
RT   in biotechnology for thiocyanate degradation.";
RL   Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for dimerization of active 70S ribosomes into 100S
CC       ribosomes in stationary phase; 100S ribosomes are translationally
CC       inactive and sometimes present during exponential growth.
CC       {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- SUBUNIT: Associates exclusively with 100S ribosomes, which are dimers
CC       of 70S ribosomes. {ECO:0000256|ARBA:ARBA00038695}.
CC   -!- SUBUNIT: Interacts with 100S ribosomes. {ECO:0000256|HAMAP-
CC       Rule:MF_00839}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- SIMILARITY: Belongs to the HPF/YfiA ribosome-associated protein family.
CC       Long HPF subfamily. {ECO:0000256|HAMAP-Rule:MF_00839}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OJV33517.1}.
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DR   EMBL; MKSU01000005; OJV33517.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1M3DFG3; -.
DR   STRING; 1895849.BGO24_08500; -.
DR   Proteomes; UP000183964; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR   GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR   Gene3D; 3.30.505.50; Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain; 1.
DR   HAMAP; MF_00839; HPF; 1.
DR   InterPro; IPR034694; HPF_long/plastid.
DR   InterPro; IPR036567; RHF-like.
DR   InterPro; IPR003489; RHF/RaiA.
DR   InterPro; IPR032528; Ribosom_S30AE_C.
DR   InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR   NCBIfam; TIGR00741; yfiA; 1.
DR   PANTHER; PTHR33231; 30S RIBOSOMAL PROTEIN; 1.
DR   PANTHER; PTHR33231:SF1; 30S RIBOSOMAL PROTEIN; 1.
DR   Pfam; PF16321; Ribosom_S30AE_C; 1.
DR   Pfam; PF02482; Ribosomal_S30AE; 1.
DR   SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00839};
KW   Translation regulation {ECO:0000256|ARBA:ARBA00022845, ECO:0000256|HAMAP-
KW   Rule:MF_00839}.
FT   DOMAIN          133..186
FT                   /note="Sigma 54 modulation/S30EA ribosomal protein C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF16321"
SQ   SEQUENCE   194 AA;  21265 MW;  D5C520D55CDFCEA7 CRC64;
     MDIRVSGHQV ATGGALKTHV EERLQSIADK YFSRALSAEV TFGKGPRDIG FKCDIVAHVM
     KGLVLKGRHE AQDAHLALDG AAGRIETQLR RYMRRLKDRQ ADKALEIAEA NGYDNAGYTL
     FAESTAEEDA GDAPLIVAET RVDVPDASVS DAVMMLDLRN TQALLFRNSG TGAYNMVYRR
     GDGTIGWVEP QRAR
//
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