ID A0A1M4M292_9FIRM Unreviewed; 484 AA.
AC A0A1M4M292;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Arginine utilization regulatory protein rocR {ECO:0000313|EMBL:SCG81785.1};
GN ORFNames=DW1_0164 {ECO:0000313|EMBL:SCG81785.1};
OS Proteiniborus sp. DW1.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Proteiniborus.
OX NCBI_TaxID=1889883 {ECO:0000313|EMBL:SCG81785.1, ECO:0000313|Proteomes:UP000185208};
RN [1] {ECO:0000313|EMBL:SCG81785.1, ECO:0000313|Proteomes:UP000185208}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DW1 {ECO:0000313|EMBL:SCG81785.1};
RA Seilhamer J.J.;
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FMDO01000004; SCG81785.1; -; Genomic_DNA.
DR RefSeq; WP_074348659.1; NZ_FMDO01000004.1.
DR AlphaFoldDB; A0A1M4M292; -.
DR STRING; 1889883.DW1_0164; -.
DR OrthoDB; 1672812at2; -.
DR Proteomes; UP000185208; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF74; TRANSCRIPTIONAL ACTIVATOR ROCR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000185208};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..57
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 156..384
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT COILED 113..140
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 484 AA; 54878 MW; B1DB768553A2D958 CRC64;
MIDQILRENI SEILDYVQEG IHIIDNTGKI VYYNKFAQKI DEIDREKAVG RHILEIYPSL
SHDTSTLLKV IRTGKPIFDV EQTFVNYKGD KITTINSSIP IKSNGTVVGA LEISKDITEV
RKLSEKIVEL QSELYNTENN GKKKEKRTAS FTFVDIIGQN PQMLKLKSLA LKAAETSSPV
IIYGETGTGK ELFVQSIHNA SPRKNKPFIA QNCAALPSNL LEGILFGTVK GGFTGAEDRP
GLFEVADGGT LLLDEINSMP LDLQAKLLRV IQEKTVRRVG AIKTTKVDVR IIAATNIHPE
KAIEDKLLRK DLYYRLNVVS LNIPELKDRI DDIPRLAEYF MQKYNRLLDK KIKKIDEEVM
ELFMTYSWPG NVRELEHLIE GIATMYDTET IKLEHLPSQL LEASQGVSSS GLLINSFQQY
FHSNGTTIPV SLKTALEAME KEMIYNTLMS MDWNITHTAE QLDIPRQTLQ YKIKKYELRE
IKGK
//
