GenomeNet

Database: UniProt
Entry: A0A1M4VET3_9FLAO
LinkDB: A0A1M4VET3_9FLAO
Original site: A0A1M4VET3_9FLAO 
ID   A0A1M4VET3_9FLAO        Unreviewed;       267 AA.
AC   A0A1M4VET3;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   SubName: Full=Ribosomal large subunit pseudouridine synthase B {ECO:0000313|EMBL:SHE67350.1};
GN   ORFNames=SAMN05444278_10419 {ECO:0000313|EMBL:SHE67350.1};
OS   Psychroflexus salarius.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Psychroflexus.
OX   NCBI_TaxID=1155689 {ECO:0000313|EMBL:SHE67350.1, ECO:0000313|Proteomes:UP000184462};
RN   [1] {ECO:0000313|EMBL:SHE67350.1, ECO:0000313|Proteomes:UP000184462}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 25661 {ECO:0000313|EMBL:SHE67350.1,
RC   ECO:0000313|Proteomes:UP000184462};
RA   Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL   Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; FQTW01000004; SHE67350.1; -; Genomic_DNA.
DR   RefSeq; WP_073192734.1; NZ_FQTW01000004.1.
DR   AlphaFoldDB; A0A1M4VET3; -.
DR   STRING; 1155689.SAMN05444278_10419; -.
DR   OrthoDB; 9807213at2; -.
DR   Proteomes; UP000184462; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProt.
DR   GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IEA:UniProt.
DR   CDD; cd00165; S4; 1.
DR   Gene3D; 3.30.70.1560; Alpha-L RNA-binding motif; 1.
DR   Gene3D; 3.30.70.580; Pseudouridine synthase I, catalytic domain, N-terminal subdomain; 1.
DR   Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR   InterPro; IPR042092; PsdUridine_s_RsuA/RluB/E/F_cat.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR   InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   InterPro; IPR036986; S4_RNA-bd_sf.
DR   InterPro; IPR020094; TruA/RsuA/RluB/E/F_N.
DR   PANTHER; PTHR47683; PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED; 1.
DR   PANTHER; PTHR47683:SF2; S4 RNA-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00849; PseudoU_synth_2; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR   SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR   PROSITE; PS50889; S4; 1.
PE   4: Predicted;
KW   Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW   Reference proteome {ECO:0000313|Proteomes:UP000184462};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT   DOMAIN          35..97
FT                   /note="RNA-binding S4"
FT                   /evidence="ECO:0000259|SMART:SM00363"
FT   REGION          1..23
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..17
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   267 AA;  30216 MW;  0A53A3903E02A5BD CRC64;
     MQKKSSNSKH KPKGNKKNLK QAKVDQQIKD PNAGMRLNKY IANSGVCSRR DADIYIKSGN
     VTVNGEVITE MGHKVKLQDE VKFDGRRINP EPKVYYLLNK PKGVYCTGSY KNNNTTVLDM
     AARVTKAAVK PVGTLESSAL GLILLTNDGT LAKKLSNLKS GIHQLYDIEL KKPLDYVHLN
     QIKDGIIIEG HKVYIDDISY VENKSKHNIG LELRSQRPKI VQKIFKKLGY EIVKLDRVMY
     GDLTKRDLPR GRMRELNKQE IINLGML
//
DBGET integrated database retrieval system