ID A0A1M4VET3_9FLAO Unreviewed; 267 AA.
AC A0A1M4VET3;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Ribosomal large subunit pseudouridine synthase B {ECO:0000313|EMBL:SHE67350.1};
GN ORFNames=SAMN05444278_10419 {ECO:0000313|EMBL:SHE67350.1};
OS Psychroflexus salarius.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Psychroflexus.
OX NCBI_TaxID=1155689 {ECO:0000313|EMBL:SHE67350.1, ECO:0000313|Proteomes:UP000184462};
RN [1] {ECO:0000313|EMBL:SHE67350.1, ECO:0000313|Proteomes:UP000184462}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 25661 {ECO:0000313|EMBL:SHE67350.1,
RC ECO:0000313|Proteomes:UP000184462};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FQTW01000004; SHE67350.1; -; Genomic_DNA.
DR RefSeq; WP_073192734.1; NZ_FQTW01000004.1.
DR AlphaFoldDB; A0A1M4VET3; -.
DR STRING; 1155689.SAMN05444278_10419; -.
DR OrthoDB; 9807213at2; -.
DR Proteomes; UP000184462; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0120159; F:rRNA pseudouridine synthase activity; IEA:UniProt.
DR GO; GO:0000455; P:enzyme-directed rRNA pseudouridine synthesis; IEA:UniProt.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.30.70.1560; Alpha-L RNA-binding motif; 1.
DR Gene3D; 3.30.70.580; Pseudouridine synthase I, catalytic domain, N-terminal subdomain; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR042092; PsdUridine_s_RsuA/RluB/E/F_cat.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom_sf.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluA.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR InterPro; IPR020094; TruA/RsuA/RluB/E/F_N.
DR PANTHER; PTHR47683; PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED; 1.
DR PANTHER; PTHR47683:SF2; S4 RNA-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR SUPFAM; SSF55120; Pseudouridine synthase; 1.
DR PROSITE; PS50889; S4; 1.
PE 4: Predicted;
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Reference proteome {ECO:0000313|Proteomes:UP000184462};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT DOMAIN 35..97
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 267 AA; 30216 MW; 0A53A3903E02A5BD CRC64;
MQKKSSNSKH KPKGNKKNLK QAKVDQQIKD PNAGMRLNKY IANSGVCSRR DADIYIKSGN
VTVNGEVITE MGHKVKLQDE VKFDGRRINP EPKVYYLLNK PKGVYCTGSY KNNNTTVLDM
AARVTKAAVK PVGTLESSAL GLILLTNDGT LAKKLSNLKS GIHQLYDIEL KKPLDYVHLN
QIKDGIIIEG HKVYIDDISY VENKSKHNIG LELRSQRPKI VQKIFKKLGY EIVKLDRVMY
GDLTKRDLPR GRMRELNKQE IINLGML
//