ID A0A1M4VG17_9LACT Unreviewed; 405 AA.
AC A0A1M4VG17;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:SHE67974.1};
GN ORFNames=SAMN02745249_00933 {ECO:0000313|EMBL:SHE67974.1};
OS Atopostipes suicloacalis DSM 15692.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Carnobacteriaceae;
OC Atopostipes.
OX NCBI_TaxID=1121025 {ECO:0000313|EMBL:SHE67974.1, ECO:0000313|Proteomes:UP000184128};
RN [1] {ECO:0000313|EMBL:SHE67974.1, ECO:0000313|Proteomes:UP000184128}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15692 {ECO:0000313|EMBL:SHE67974.1,
RC ECO:0000313|Proteomes:UP000184128};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; FQUF01000011; SHE67974.1; -; Genomic_DNA.
DR RefSeq; WP_001291561.1; NZ_FQUF01000011.1.
DR AlphaFoldDB; A0A1M4VG17; -.
DR SMR; A0A1M4VG17; -.
DR STRING; 1121025.SAMN02745249_00933; -.
DR GeneID; 84602600; -.
DR OrthoDB; 9803188at2; -.
DR Proteomes; UP000184128; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008907; F:integrase activity; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR CDD; cd01189; INT_ICEBs1_C_like; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR InterPro; IPR004191; Integrase_Tn916-type_DNA-bd_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF02920; Integrase_DNA; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00023195};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000184128};
KW Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 79..163
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 186..392
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 405 AA; 47022 MW; AE123561BF3DF6A3 CRC64;
MSEKRRDNKG RILKTGESQR KDGRYLYKYI DSFGEPQFVY SWKLVATDRV PAGKRDCISL
REKIAELQKD IHDGIDVVGK KMTLCQLYAK QNAQRPKVRK NTETGRKYLM DILKKDKLGV
RSIDSIKPSD AKEWAIRMSE NGYAYQTINN YKRSLKASFY IAIQDDCVRK NPFDFQLKAV
LDDDTVPKTV LTEEQEEKLL AFAKADKTYS KNYDEILILL KTGLRISEFG GLTLPDLDFE
NRLVNIDHQL LRDTEIGYYI ETPKTKSGER QVPMVEEAYQ AFKRVLANRK NDKRVEIDGY
SDFLFLNRKN YPKVASDYNG MMKGLVKKYN KYNEDKLPHI TPHSLRHTFC TNYANAGMNP
KALQYIMGHA NIAMTLNYYA HATFDSAMAE MKRLNKEKQQ ERLVA
//
