ID A0A1M5E0F9_9FLAO Unreviewed; 586 AA.
AC A0A1M5E0F9;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=SAMN05444377_11714 {ECO:0000313|EMBL:SHF72670.1};
OS Flavobacterium fontis.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1124188 {ECO:0000313|EMBL:SHF72670.1, ECO:0000313|Proteomes:UP000184147};
RN [1] {ECO:0000313|EMBL:SHF72670.1, ECO:0000313|Proteomes:UP000184147}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 25660 {ECO:0000313|EMBL:SHF72670.1,
RC ECO:0000313|Proteomes:UP000184147};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR EMBL; FQVQ01000017; SHF72670.1; -; Genomic_DNA.
DR RefSeq; WP_073365052.1; NZ_FQVQ01000017.1.
DR AlphaFoldDB; A0A1M5E0F9; -.
DR STRING; 1124188.SAMN05444377_11714; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000184147; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 3.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000184147};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:SHF72670.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 49..112
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 130..196
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 217..285
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 302..372
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 389..459
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 476..541
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 586 AA; 65423 MW; A272126F398F096B CRC64;
MAELNKDQVA FLNEFNWHNY AEGIDAVDEN NLREFEDLVA KTFISTDNEE VVEGVVVRIT
DRDAIVDINA KSEGVISLNE FRYNPNLKVG DKVEVLIDVR EDKTGQLVLS HRKARTIKSW
DRVIAAHETG EIVNGFVKCR TKGGMIVDVF GIEAFLPGSQ IDVKPIRDYD VYVNKMMEFK
VVKINHEFKN VVVSHKALIE ADIEVQKKEI IGQLEKGQVL EGVVKNITSY GVFIDLGGVD
GLIHITDLSW SRINHPSEVL ELDQKLNVVI LDFDDEKTRI QLGLKQLHAH PWDALGSELS
VGDKVKGKVV VIADYGAFIE VAEGVEGLIH VSEMSWSTHL RSAQDFVKVG DEVEAVILTL
DRDERKMSLG IKQLSQDPWT DITSKYPVGS KHTGIVRNFT NFGIFVELEE GIDGLVYISD
LSWTKKIKHP SEFVNVGDKL DVVVLELDVD GRKLSLGHKQ TTENPWDKHE AAYGVGTVHS
GTIAEIVDKG ATVDFGDDVV AFIPARHLEK EDGKKLKKGE SAEFKVIEFN KEFKRVVASH
TAIFREEEEK NVKAVETTST NAPASTLGDN NDILAELKAK MEKGEK
//
