ID A0A1M5MJA4_9GAMM Unreviewed; 799 AA.
AC A0A1M5MJA4;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Penicillin amidase {ECO:0000313|EMBL:SHG77295.1};
GN ORFNames=SAMN02745129_0663 {ECO:0000313|EMBL:SHG77295.1};
OS Ferrimonas marina.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Ferrimonadaceae; Ferrimonas.
OX NCBI_TaxID=299255 {ECO:0000313|EMBL:SHG77295.1, ECO:0000313|Proteomes:UP000184268};
RN [1] {ECO:0000313|EMBL:SHG77295.1, ECO:0000313|Proteomes:UP000184268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16917 {ECO:0000313|EMBL:SHG77295.1,
RC ECO:0000313|Proteomes:UP000184268};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC Evidence={ECO:0000256|PIRSR:PIRSR001227-2};
CC Note=Binds 1 Ca(2+) ion per dimer. {ECO:0000256|PIRSR:PIRSR001227-2};
CC -!- SUBUNIT: Heterodimer of an alpha subunit and a beta subunit processed
CC from the same precursor. {ECO:0000256|ARBA:ARBA00038735}.
CC -!- SIMILARITY: Belongs to the peptidase S45 family.
CC {ECO:0000256|ARBA:ARBA00006586}.
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DR EMBL; FQXG01000001; SHG77295.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1M5MJA4; -.
DR STRING; 299255.SAMN02745129_0663; -.
DR OrthoDB; 9760084at2; -.
DR Proteomes; UP000184268; Unassembled WGS sequence.
DR GO; GO:0016811; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:InterPro.
DR GO; GO:0009372; P:quorum sensing; IEA:UniProtKB-KW.
DR CDD; cd03747; Ntn_PGA_like; 1.
DR Gene3D; 1.10.1400.10; -; 1.
DR Gene3D; 2.30.120.10; -; 1.
DR Gene3D; 3.60.20.10; Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1; 1.
DR Gene3D; 1.10.439.10; Penicillin Amidohydrolase, domain 1; 1.
DR InterPro; IPR029055; Ntn_hydrolases_N.
DR InterPro; IPR014395; Pen/GL7ACA/AHL_acylase.
DR InterPro; IPR043147; Penicillin_amidase_A-knob.
DR InterPro; IPR023343; Penicillin_amidase_dom1.
DR InterPro; IPR043146; Penicillin_amidase_N_B-knob.
DR InterPro; IPR002692; S45.
DR PANTHER; PTHR34218:SF4; ACYL-HOMOSERINE LACTONE ACYLASE QUIP; 1.
DR PANTHER; PTHR34218; PEPTIDASE S45 PENICILLIN AMIDASE; 1.
DR Pfam; PF01804; Penicil_amidase; 1.
DR PIRSF; PIRSF001227; Pen_acylase; 1.
DR SUPFAM; SSF56235; N-terminal nucleophile aminohydrolases (Ntn hydrolases); 1.
PE 3: Inferred from homology;
KW Calcium {ECO:0000256|PIRSR:PIRSR001227-2};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|PIRSR:PIRSR001227-2};
KW Reference proteome {ECO:0000313|Proteomes:UP000184268};
KW Zymogen {ECO:0000256|ARBA:ARBA00023145}.
FT ACT_SITE 262
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-1"
FT BINDING 199
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-2"
FT BINDING 333
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-2"
FT BINDING 336
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0000256|PIRSR:PIRSR001227-2"
SQ SEQUENCE 799 AA; 87860 MW; F51C9D74826E626B CRC64;
MEASVGRLEA WSVTRWLKRT LISLLILLLL AAAGLYAVIA GSKGKLSGEV SVAGLEQPVS
IHLDDLGRPH VQAQNLADAL AAQGYLHGSE RLWQMELFRR AGQGRLAALF GSDMVEADIE
LWRMGVPQLG QQLQQHASDS MKQWVTAYVA GINQAIELQR SRPLELWLLQ GEISPWTESD
VFAVGALIAF NSANNHKNEL LRLALAQALT PAQFERFLDD GSDTAGFPFI LAGEGESQAL
LSPSAMLDPM DNPNIPRLRF GSNGWVVAPD KTAEGQALFA FDSHDYLGLP NLFYEVHLHF
GQQQIRGWSV PGLPGVINGY NDKIAWGFTN IGDTQDLFIE TRHPDKPDHF LLDGQWLPAE
VSQHSLPVKG SAPVAFTITR THNGPLIREE PLLSFRWTMH QFDQFADSGM GLEGLLMLNL
ATDWDSFTAA IDRHAAPTLN ATYADSDGNI GFRTAGLIPE RGLGEGLYPL DGSRSEHQWQ
GMVPVTEMPR RYNPPEGFLA AANARVNPRG VGPMVSADNA APYRIARLQQ VLAEDNAITF
EQMQRWQMDW HDGQAQALLP ALLRQAQAGG VDQDARFAEG ISLLKAWQTQ PLADTDSAAA
LIFQQWYLQI ADAVFAQPLG EFLYGQLLKR NYVLNFALDG LILEAEDPQW WVEGRDDMVA
NALAHTLASL HGELGGEPRT WRLDQKQSVA LPHEIGKAVP ALGRWLNGEQ QPWGGTPAAV
GRASYRYDRP FKVSHGATVR VVAQMGEQVK AASVIPGGQS GHPLSPHYRD QYDLWREGQL
IPVEDAPASA PQLTLLPLE
//