ID A0A1M5RES2_9CLOT Unreviewed; 260 AA.
AC A0A1M5RES2;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE SubName: Full=Putative peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:SHH24862.1};
GN ORFNames=SAMN02745207_00495 {ECO:0000313|EMBL:SHH24862.1};
OS Clostridium grantii DSM 8605.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1121316 {ECO:0000313|EMBL:SHH24862.1, ECO:0000313|Proteomes:UP000184447};
RN [1] {ECO:0000313|EMBL:SHH24862.1, ECO:0000313|Proteomes:UP000184447}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8605 {ECO:0000313|EMBL:SHH24862.1,
RC ECO:0000313|Proteomes:UP000184447};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
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DR EMBL; FQXM01000003; SHH24862.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1M5RES2; -.
DR STRING; 1121316.SAMN02745207_00495; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000184447; Unassembled WGS sequence.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR002477; Peptidoglycan-bd-like.
DR InterPro; IPR036365; PGBD-like_sf.
DR InterPro; IPR036366; PGBDSf.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF24; L,D-TRANSPEPTIDASE ERFK_SRFK-RELATED; 1.
DR Pfam; PF01471; PG_binding_1; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR SUPFAM; SSF47090; PGBD-like; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000184447};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 71..178
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
FT DOMAIN 198..243
FT /note="Peptidoglycan binding-like"
FT /evidence="ECO:0000259|Pfam:PF01471"
SQ SEQUENCE 260 AA; 29451 MW; 2C137A1D660D797B CRC64;
MMWNKKAYKL LISSFLFMVV IINNFLIIDS LALSSNTNFH STEVDSFISN NINKLNLNVE
ITADYNPDKP TIIICDICEC IMYVFQENNV IAKYPISGGK PSTPSPLGTW TIISKDTWGE
GFGGRWMGFN VPWGKYGIHG TIFPNSVGWN SSHGCIRMYN NDVAELYKIT KHGTKVIIWG
GPYGNFGSYF RTLKPGMRGS DIFELQEILK SKGYYKANAD GIYGDYFKNV VHKFQKDNNM
TITDTLGWNF YSKLGVDLIE
//
