ID A0A1M5S3X6_9CLOT Unreviewed; 300 AA.
AC A0A1M5S3X6;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains {ECO:0000313|EMBL:SHH32653.1};
GN ORFNames=SAMN02745196_00016 {ECO:0000313|EMBL:SHH32653.1};
OS Clostridium collagenovorans DSM 3089.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1121306 {ECO:0000313|EMBL:SHH32653.1, ECO:0000313|Proteomes:UP000184526};
RN [1] {ECO:0000313|EMBL:SHH32653.1, ECO:0000313|Proteomes:UP000184526}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 3089 {ECO:0000313|EMBL:SHH32653.1,
RC ECO:0000313|Proteomes:UP000184526};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FQXP01000003; SHH32653.1; -; Genomic_DNA.
DR RefSeq; WP_072828709.1; NZ_FQXP01000003.1.
DR AlphaFoldDB; A0A1M5S3X6; -.
DR STRING; 1121306.SAMN02745196_00016; -.
DR OrthoDB; 9815009at2; -.
DR Proteomes; UP000184526; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR028349; PafC.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF6; HTH DEOR-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR PIRSF; PIRSF016838; PafC; 1.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:SHH32653.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000184526};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..60
FT /note="HTH deoR-type"
FT /evidence="ECO:0000259|PROSITE:PS51000"
SQ SEQUENCE 300 AA; 35216 MW; 5BAF85E74383C99A CRC64;
MQVNRLFEII YILLEKNMIT AKELAERFEV SQRTIYRDIE TLSTAGIPVY MSKGKGGGIS
ILPDFILNKA ILTEEEKKEI LSSIRAVNAV SFSDPAPENV LRKLNNILGE NDTDWIEVDF
SNWGNAEREK ETFNNLKSAI LSKKVVKFDY SSGKGENISR EVCPLKLYFK GQSWYMYGYC
RIRNDYRFFK LRRIKGLCIS KESFNIKAPQ NIMKEDNIFN DEFVTLKMRI YPKMAYRVYD
EFEYFKKLDD GSFIVTIEYP KGEWLFSYIS SFGEECEVLE PQEIRKEIKN KIEKMLLNYS
//