ID A0A1M6SK25_9RHOB Unreviewed; 335 AA.
AC A0A1M6SK25;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=AraC-type DNA-binding protein {ECO:0000313|EMBL:SHK45091.1};
GN ORFNames=SAMN05444000_13015 {ECO:0000313|EMBL:SHK45091.1};
OS Shimia gijangensis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae.
OX NCBI_TaxID=1470563 {ECO:0000313|EMBL:SHK45091.1, ECO:0000313|Proteomes:UP000183982};
RN [1] {ECO:0000313|Proteomes:UP000183982}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 100564 {ECO:0000313|Proteomes:UP000183982};
RA Varghese N., Submissions S.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FQZQ01000030; SHK45091.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1M6SK25; -.
DR STRING; 1470563.SAMN05444000_13015; -.
DR Proteomes; UP000183982; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR032687; AraC-type_N.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR PANTHER; PTHR47894; HTH-TYPE TRANSCRIPTIONAL REGULATOR GADX; 1.
DR PANTHER; PTHR47894:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR VQSM; 1.
DR Pfam; PF12625; Arabinose_bd; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:SHK45091.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000183982};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 230..331
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 335 AA; 37464 MW; 0C1AF759B69B78A3 CRC64;
MILQKKNERF LHVCNEISNK LGDAKMEQLV RRVGVDPKHR ADADVTTLQE AQLLREACKS
AEDISFAARI GSTFRQSQTL TGYIAKSSKT LGSAIENSAR FYTLADSETN FDLSRTSSED
VMKIENNNGA LLRHHRFQEF LVFGLLARLR VLAGVDFFPE KLCLQHEVGD HQQPFTKLAG
CRVEFASEFT GIVFGQTTLD LPMANYDPSL VDYLSELGAN MLAAHGTHRD SYRAQVEKHL
IKQLPGRILS ADEVADKLAM SRRTLTRHLT AEGTGFREIV DGLRFDIAKT YLKDGLSISE
IAFMLGYADH AAFSTAFTRW AGQSPRTFQK SNQGH
//
