ID A0A1M7A3L4_9FLAO Unreviewed; 616 AA.
AC A0A1M7A3L4;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|ARBA:ARBA00012895};
DE EC=5.6.2.2 {ECO:0000256|ARBA:ARBA00012895};
GN ORFNames=SAMN05443634_108156 {ECO:0000313|EMBL:SHL37304.1};
OS Chishuiella changwenlii.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae;
OC Chishuiella.
OX NCBI_TaxID=1434701 {ECO:0000313|EMBL:SHL37304.1, ECO:0000313|Proteomes:UP000184120};
RN [1] {ECO:0000313|Proteomes:UP000184120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 27989 {ECO:0000313|Proteomes:UP000184120};
RA Varghese N., Submissions S.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP-dependent breakage, passage and rejoining of double-
CC stranded DNA.; EC=5.6.2.2; Evidence={ECO:0000256|ARBA:ARBA00000185};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR EMBL; FRBH01000008; SHL37304.1; -; Genomic_DNA.
DR RefSeq; WP_072932754.1; NZ_FRBH01000008.1.
DR AlphaFoldDB; A0A1M7A3L4; -.
DR STRING; 1434701.SAMN05443634_108156; -.
DR OrthoDB; 9802808at2; -.
DR Proteomes; UP000184120; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003918; F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; IEA:UniProtKB-EC.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR CDD; cd01030; TOPRIM_TopoIIA_like; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.40.50.670; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR InterPro; IPR003594; HATPase_C.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR001241; Topo_IIA.
DR InterPro; IPR013760; Topo_IIA-like_dom_sf.
DR InterPro; IPR013759; Topo_IIA_B_C.
DR InterPro; IPR013506; Topo_IIA_bsu_dom2.
DR InterPro; IPR018522; TopoIIA_CS.
DR InterPro; IPR006171; TOPRIM_domain.
DR PANTHER; PTHR45866; DNA GYRASE/TOPOISOMERASE SUBUNIT B; 1.
DR PANTHER; PTHR45866:SF2; DNA TOPOISOMERASE (ATP-HYDROLYZING); 1.
DR Pfam; PF00204; DNA_gyraseB; 1.
DR Pfam; PF02518; HATPase_c; 1.
DR Pfam; PF01751; Toprim; 1.
DR PRINTS; PR00418; TPI2FAMILY.
DR SMART; SM00387; HATPase_c; 1.
DR SMART; SM00433; TOP2c; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF56719; Type II DNA topoisomerase; 1.
DR PROSITE; PS00177; TOPOISOMERASE_II; 1.
DR PROSITE; PS50880; TOPRIM; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235, ECO:0000313|EMBL:SHL37304.1}.
FT DOMAIN 410..516
FT /note="Toprim"
FT /evidence="ECO:0000259|PROSITE:PS50880"
FT COILED 347..381
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 616 AA; 70469 MW; 3EC0052932F3E84D CRC64;
MSELNQQANY TEDNIKTLDW REHIRMRPGM YIGKLGDGSS QDDGIYILLK EIVDNCIDEF
VMGAGKTIEI NLRDEEVTVR DYGRGIPLGK MVDAVSKMNT GGKYDSQAFK KSVGLNGVGT
KAVNALSTNF RVQSVRDGKT RVAEFERGIL IEQEDEKETS LRKGTKITFV PDKSIFLNFK
FRKEYVDKML KNYVYLNPGL KIIFNGEEFF SKDGLKDLLK DNIEEETIYD IIHLKGEDIE
LAMTHSSKSY SETYYSFVNG QNTTQGGTHL AAFKEAIVKT VREFYNKNYD PADIRKSIIG
AISIKVIEPV FESQTKTKLG SNEIGPGLST VRTFVNDFIK TNLDNFLHKN IEVAQAIERK
IKQSENERKE LSGIRKLARD RAKKVSLHNK KLRDCRQHYN DAKAELRLDS TIFITEGDSA
SGSITKSRSV ETQAVFSLRG KPLNSYGLSK KIVYENEEFN LLQAALNIEE GLEDLRYNNV
VIATDADVDG MHIRLLIITF FLQFFPELIK EGHLYILQTP LFRVRNKKET RYCYSEEERL
KALEEVKNPE ITRFKGLGEI SPDEFKHFIG KDIRLEPVMI GKDQTIDELL EFYMGKNTPT
RQEFIINNLA IETIKN
//