GenomeNet

Database: UniProt
Entry: A0A1M7R1Y5_9ACTN
LinkDB: A0A1M7R1Y5_9ACTN
Original site: A0A1M7R1Y5_9ACTN 
ID   A0A1M7R1Y5_9ACTN        Unreviewed;       136 AA.
AC   A0A1M7R1Y5;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   RecName: Full=Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265};
DE            Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};
DE            EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};
DE   AltName: Full=Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265};
GN   Name=vapC {ECO:0000256|HAMAP-Rule:MF_00265};
GN   ORFNames=SAMN05216499_1782 {ECO:0000313|EMBL:SHN38783.1};
OS   Actinacidiphila paucisporea.
OC   Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC   Streptomycetaceae; Actinacidiphila.
OX   NCBI_TaxID=310782 {ECO:0000313|EMBL:SHN38783.1, ECO:0000313|Proteomes:UP000184111};
RN   [1] {ECO:0000313|EMBL:SHN38783.1, ECO:0000313|Proteomes:UP000184111}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CGMCC 4.2025 {ECO:0000313|EMBL:SHN38783.1,
RC   ECO:0000313|Proteomes:UP000184111};
RA   Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL   Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Toxic component of a toxin-antitoxin (TA) system. An RNase.
CC       {ECO:0000256|HAMAP-Rule:MF_00265}.
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|HAMAP-Rule:MF_00265};
CC   -!- SIMILARITY: Belongs to the PINc/VapC protein family.
CC       {ECO:0000256|ARBA:ARBA00038093, ECO:0000256|HAMAP-Rule:MF_00265}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; FRBI01000078; SHN38783.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1M7R1Y5; -.
DR   STRING; 310782.SAMN05216499_1782; -.
DR   OrthoDB; 32665at2; -.
DR   Proteomes; UP000184111; Unassembled WGS sequence.
DR   GO; GO:0000287; F:magnesium ion binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR   GO; GO:0090729; F:toxin activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR   HAMAP; MF_00265; VapC_Nob1; 1.
DR   InterPro; IPR029060; PIN-like_dom_sf.
DR   InterPro; IPR002716; PIN_dom.
DR   InterPro; IPR022907; VapC_family.
DR   Pfam; PF01850; PIN; 1.
DR   SUPFAM; SSF88723; PIN domain-like; 1.
PE   3: Inferred from homology;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|HAMAP-Rule:MF_00265};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842, ECO:0000256|HAMAP-Rule:MF_00265};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|HAMAP-
KW   Rule:MF_00265};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722, ECO:0000256|HAMAP-Rule:MF_00265};
KW   Reference proteome {ECO:0000313|Proteomes:UP000184111};
KW   Toxin {ECO:0000256|HAMAP-Rule:MF_00265};
KW   Toxin-antitoxin system {ECO:0000256|ARBA:ARBA00022649, ECO:0000256|HAMAP-
KW   Rule:MF_00265}.
FT   DOMAIN          5..121
FT                   /note="PIN"
FT                   /evidence="ECO:0000259|Pfam:PF01850"
FT   BINDING         7
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00265"
FT   BINDING         98
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_00265"
SQ   SEQUENCE   136 AA;  14828 MW;  73BC45168473A614 CRC64;
     MIATVLDTGP LAAAFNATDR RHPECAALLT SLTGRRLLPS PVLTEVCWLL ERWPKVEAAF
     LTEVARGTFE LVHLTPADLT RMGELILQYA DFPLGGVDAS VIAVAERFGV DRVATLDRRH
     FGVVKPAHVT TLTLLP
//
DBGET integrated database retrieval system