ID A0A1M7ZK86_9BACT Unreviewed; 585 AA.
AC A0A1M7ZK86;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=SAMN04488108_3981 {ECO:0000313|EMBL:SHO65314.1};
OS Algoriphagus zhangzhouensis.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC Algoriphagus.
OX NCBI_TaxID=1073327 {ECO:0000313|EMBL:SHO65314.1, ECO:0000313|Proteomes:UP000184609};
RN [1] {ECO:0000313|Proteomes:UP000184609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 25035 {ECO:0000313|Proteomes:UP000184609};
RA Varghese N., Submissions S.;
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
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DR EMBL; FRXN01000007; SHO65314.1; -; Genomic_DNA.
DR RefSeq; WP_073573581.1; NZ_SORH01000007.1.
DR AlphaFoldDB; A0A1M7ZK86; -.
DR STRING; 1073327.SAMN04488108_3981; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000184609; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF13; 30S RIBOSOMAL PROTEIN S1; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 3.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000184609};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:SHO65314.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 43..106
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 124..190
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 211..279
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 296..366
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 385..455
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 472..537
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT REGION 549..572
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 585 AA; 65295 MW; 64CAEBC0066EB6C0 CRC64;
MSNNSDFNWE NFETKGFGEG YSKAQREEMA QMYEGTLNEI TEKEVIKGTV VGVNDKDVII
NIGFKSDGLV PLNEFRDLES IKPGDEVEVF IEEQENALGQ LILSRKKAKI VRAWQDIESA
FENDSVIEGL VKRRTKGGLI VDIYGVEAFL PGSQIDVKPI RDFDIYVGKK MEVKVVKINH
ANDNVVVSHK VLIEKDLEKQ KAEILNNLEK GQVLEGVIKN MTNFGVFIDL GGVDGLLHIT
DISWGRINHP EEVLQLDQKV QIVVLDFDDD KKRISLGMKQ LTAHPWDSLA GNLEVGSKVQ
GKIVNVADYG AFLELAPGVE GLIHVSEMSW SQHLRNPADF VKVGDEIEAV VLTLDKDDRK
MSLGIKQLTE DPWTKEDMGT KYAVGTKHKG VVRNLTNFGL FLELEEGIDG LVHVSDLSWT
KKIKHPSEFV KVGDELEVAV LELDVENRRL ALGHKQLEEN PWDTFESVFP VGSVHKCTVV
SKNDKGAVLE LPYGLEGFAT SKNLEKEDGS QVEVGESLDF KVAEFSKDDK RIVMSHTAMF
REEIKPAKKA VKKKEDAADN SPAEKSTLGD LDALAELKEK MEGKK
//
