ID A0A1N6FV62_9RHOB Unreviewed; 395 AA.
AC A0A1N6FV62;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Site-specific recombinase XerD {ECO:0000313|EMBL:SIN99143.1};
GN ORFNames=SAMN05444722_0034 {ECO:0000313|EMBL:SIN99143.1};
OS Rhodovulum sp. ES.010.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Rhodovulum.
OX NCBI_TaxID=1882821 {ECO:0000313|EMBL:SIN99143.1, ECO:0000313|Proteomes:UP000184943};
RN [1] {ECO:0000313|EMBL:SIN99143.1, ECO:0000313|Proteomes:UP000184943}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ES.010 {ECO:0000313|EMBL:SIN99143.1,
RC ECO:0000313|Proteomes:UP000184943};
RA Jaros S., Januszkiewicz K., Wedrychowicz H.;
RL Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the 'phage' integrase family.
CC {ECO:0000256|ARBA:ARBA00008857}.
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DR EMBL; FSRS01000001; SIN99143.1; -; Genomic_DNA.
DR RefSeq; WP_074218269.1; NZ_FSRS01000001.1.
DR AlphaFoldDB; A0A1N6FV62; -.
DR STRING; 1882821.SAMN05444722_0034; -.
DR OrthoDB; 6388170at2; -.
DR Proteomes; UP000184943; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0075713; P:establishment of integrated proviral latency; IEA:UniProtKB-KW.
DR GO; GO:0046718; P:viral entry into host cell; IEA:UniProtKB-KW.
DR GO; GO:0044826; P:viral genome integration into host DNA; IEA:UniProtKB-KW.
DR CDD; cd00796; INT_Rci_Hp1_C; 1.
DR Gene3D; 1.10.150.130; -; 1.
DR Gene3D; 3.30.160.390; Integrase, DNA-binding domain; 1.
DR Gene3D; 1.10.443.10; Intergrase catalytic core; 1.
DR InterPro; IPR044068; CB.
DR InterPro; IPR011010; DNA_brk_join_enz.
DR InterPro; IPR013762; Integrase-like_cat_sf.
DR InterPro; IPR002104; Integrase_catalytic.
DR InterPro; IPR038488; Integrase_DNA-bd_sf.
DR InterPro; IPR025166; Integrase_DNA_bind_dom.
DR InterPro; IPR010998; Integrase_recombinase_N.
DR PANTHER; PTHR30629; PROPHAGE INTEGRASE; 1.
DR PANTHER; PTHR30629:SF2; PROPHAGE INTEGRASE INTS-RELATED; 1.
DR Pfam; PF13356; Arm-DNA-bind_3; 1.
DR Pfam; PF00589; Phage_integrase; 1.
DR SUPFAM; SSF56349; DNA breaking-rejoining enzymes; 1.
DR PROSITE; PS51900; CB; 1.
DR PROSITE; PS51898; TYR_RECOMBINASE; 1.
PE 3: Inferred from homology;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01248}; Reference proteome {ECO:0000313|Proteomes:UP000184943};
KW Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 95..175
FT /note="Core-binding (CB)"
FT /evidence="ECO:0000259|PROSITE:PS51900"
FT DOMAIN 197..371
FT /note="Tyr recombinase"
FT /evidence="ECO:0000259|PROSITE:PS51898"
SQ SEQUENCE 395 AA; 44400 MW; 8503E527B28ACB42 CRC64;
MPKLTKRSVD ALAPEARDYF VWDSEVKGFG VRVMRTGVKT YQLQYKKGGR TRRTSLGRHG
SITADMARAR AKELLGDLCR GSDPIEEIAQ HRRAPTVAAL CDRFFETHVA ERCKVSTQKE
YRRCIDLFIK PAIGTFKVVD VARSDVAELH HRLRHVPYQA NRVLGVISKM FNLAEVWGLR
PDGSNPCRHV PKYREKKRER YLTQAELQRL GTVLSEVLRE GSETPHMVGA FRLLILTGCR
LGEIQTLKWE YVTAQGLELP DTKTGARRIP LPQAARDVLH SIPHVPGNPY VIAGKVPGQY
ATDFQHPWRR IRARAGLPDV RIHDLRHTYA SNAVSSGMPI QMVGKLLGHT QLQTTMRYAH
LADDAVRRAA EENASRLSSV LGDAGNAMPA LRVVK
//
