ID A0A1N6Z384_9ACTN Unreviewed; 424 AA.
AC A0A1N6Z384;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:SIR21191.1};
GN ORFNames=SAMN05444858_107149 {ECO:0000313|EMBL:SIR21191.1};
OS Micromonospora avicenniae.
OC Bacteria; Actinomycetota; Actinomycetes; Micromonosporales;
OC Micromonosporaceae; Micromonospora.
OX NCBI_TaxID=1198245 {ECO:0000313|EMBL:SIR21191.1, ECO:0000313|Proteomes:UP000186004};
RN [1] {ECO:0000313|EMBL:SIR21191.1, ECO:0000313|Proteomes:UP000186004}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 45758 {ECO:0000313|EMBL:SIR21191.1,
RC ECO:0000313|Proteomes:UP000186004};
RA Mah S.A., Swanson W.J., Moy G.W., Vacquier V.D.;
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FTNF01000007; SIR21191.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1N6Z384; -.
DR STRING; 1198245.SAMN05444858_107149; -.
DR Proteomes; UP000186004; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR47756:SF2; BLL6612 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000186004};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 11..77
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 114..165
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 183..283
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 424 AA; 46183 MW; 20D4AD5D21A439D4 CRC64;
MISGSRGVEE LLRTLAPQVL GLLVRRHGQF DRCEDAVQEA LLAAALQWPE QGVPENPRAW
LLTVATRRLT DEWRSERARR DREVAVAVRE PAYAAVAPAA DAEPPAGDDT LRLLFLCCHP
ALARSAQVAL TLRAVGGLTT AQIARAFLVP EATMSQRIRR AKQRIEATGA KFTMPSAAER
DERLGAVRQV LYLIFNEGYT ASSGPDLHRA ELTGEAIRLT RMLHALLPDD GEVTGLLALM
LLTDSHRAAR LGPGGELVPL AEQDRTRWDR AAIEEGVALI TESLTWSPPG PYQLQAAIAA
VHSEAPSAAE TDWPQIVALY RLLARIAPNP MVTLNQAVAV AMVDGPRAGL AMLEPLDEDE
RTAAHHRVAA VRAHLLELAG EPGPARAAYL DAARATTSLP ERRYLELRAA RLVVVDDQPR
RTDQ
//
