ID A0A1N6ZHZ6_9EURY Unreviewed; 93 AA.
AC A0A1N6ZHZ6;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Large ribosomal subunit protein eL42 {ECO:0000256|HAMAP-Rule:MF_01476};
GN Name=rpl44e {ECO:0000256|HAMAP-Rule:MF_01476};
GN ORFNames=BB347_01245 {ECO:0000313|EMBL:APX95345.1}, SAMN05421809_0811
GN {ECO:0000313|EMBL:SIR26439.1};
OS Natronorubrum daqingense.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Natrialbales;
OC Natrialbaceae; Natronorubrum.
OX NCBI_TaxID=588898 {ECO:0000313|EMBL:SIR26439.1, ECO:0000313|Proteomes:UP000185687};
RN [1] {ECO:0000313|EMBL:APX95345.1, ECO:0000313|Proteomes:UP000187321}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JX313 {ECO:0000313|EMBL:APX95345.1,
RC ECO:0000313|Proteomes:UP000187321};
RA Shuang W.;
RT "Complete genome sequence of Haloterrigena daqingensis type strain
RT (JX313T).";
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:SIR26439.1, ECO:0000313|Proteomes:UP000185687}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CGMCC 1.8909 {ECO:0000313|EMBL:SIR26439.1,
RC ECO:0000313|Proteomes:UP000185687};
RA Mah S.A., Swanson W.J., Moy G.W., Vacquier V.D.;
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds to the 23S rRNA. {ECO:0000256|HAMAP-Rule:MF_01476}.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|HAMAP-Rule:MF_01476};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000256|HAMAP-Rule:MF_01476};
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000256|HAMAP-
CC Rule:MF_01476}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL42 family.
CC {ECO:0000256|ARBA:ARBA00009364, ECO:0000256|HAMAP-Rule:MF_01476,
CC ECO:0000256|RuleBase:RU000666}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|HAMAP-Rule:MF_01476}.
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DR EMBL; CP019327; APX95345.1; -; Genomic_DNA.
DR EMBL; FTNP01000001; SIR26439.1; -; Genomic_DNA.
DR RefSeq; WP_076579192.1; NZ_FTNP01000001.1.
DR AlphaFoldDB; A0A1N6ZHZ6; -.
DR STRING; 588898.BB347_01245; -.
DR GeneID; 30954526; -.
DR KEGG; hda:BB347_01245; -.
DR OrthoDB; 52456at2157; -.
DR Proteomes; UP000185687; Unassembled WGS sequence.
DR Proteomes; UP000187321; Chromosome.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0070180; F:large ribosomal subunit rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.450.80; -; 1.
DR HAMAP; MF_01476; Ribosomal_L44e; 1.
DR InterPro; IPR000552; Ribosomal_eL44.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR Pfam; PF00935; Ribosomal_L44; 1.
DR SUPFAM; SSF57829; Zn-binding ribosomal proteins; 1.
DR PROSITE; PS01172; RIBOSOMAL_L44E; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|HAMAP-Rule:MF_01476};
KW Reference proteome {ECO:0000313|Proteomes:UP000185687};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01476};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01476}; RNA-binding {ECO:0000256|HAMAP-Rule:MF_01476};
KW rRNA-binding {ECO:0000256|HAMAP-Rule:MF_01476};
KW Zinc {ECO:0000256|HAMAP-Rule:MF_01476};
KW Zinc-finger {ECO:0000256|HAMAP-Rule:MF_01476}.
FT REGION 18..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 11
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 14
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 72
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
FT BINDING 75
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01476"
SQ SEQUENCE 93 AA; 10804 MW; 2D98946971C69BBA CRC64;
MQMPRRFNTY CPHCNEHHEH EVEKARSGRS SGMKWDARRT RRNSATIGNS GRFSKVPGGE
KPTKKTDLKY RCGECGKAHL REGWRAGRLE FQE
//
