ID A0A1N7IKQ1_9BACI Unreviewed; 257 AA.
AC A0A1N7IKQ1;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE SubName: Full=RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG {ECO:0000313|EMBL:SIS37566.1};
GN ORFNames=SAMN05421687_101383 {ECO:0000313|EMBL:SIS37566.1};
OS Salimicrobium flavidum.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Salimicrobium.
OX NCBI_TaxID=570947 {ECO:0000313|EMBL:SIS37566.1, ECO:0000313|Proteomes:UP000187608};
RN [1] {ECO:0000313|EMBL:SIS37566.1, ECO:0000313|Proteomes:UP000187608}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 23127 {ECO:0000313|EMBL:SIS37566.1,
RC ECO:0000313|Proteomes:UP000187608};
RA Mah S.A., Swanson W.J., Moy G.W., Vacquier V.D.;
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; FTOC01000001; SIS37566.1; -; Genomic_DNA.
DR RefSeq; WP_076556644.1; NZ_FTOC01000001.1.
DR AlphaFoldDB; A0A1N7IKQ1; -.
DR STRING; 570947.SAMN05421687_101383; -.
DR OrthoDB; 9799825at2; -.
DR Proteomes; UP000187608; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.20.140.160; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR012845; RNA_pol_sigma_FliA_WhiG.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR NCBIfam; TIGR02479; FliA_WhiG; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30385:SF7; RNA POLYMERASE SIGMA FACTOR FLIA; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PIRSF; PIRSF000770; RNA_pol_sigma-SigE/K; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 222..248
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00716"
SQ SEQUENCE 257 AA; 29954 MW; 5FB09C1F8BDB8730 CRC64;
MSNSISSEEQ KLWDRWLNQN DKDAANELIV QYEYLVSYQV QRISQHLPKS VSKDDIKSLA
YFGLYDALKK FDLGRELKFV TYASFRIKGS IIDGLRKEDW LPRTVRDKSK KIEQAAETLE
QTLGRSPDSH EIAEVLEMTP QEVEEITKDA YFSNVLSVEE KPKDTGDEHK EGIGYMIPDE
QGELPDESVV KDENIRELIE EIKQLNDKEQ LVLSLFYEEE LTLTEIGKVM ELTTSRISQI
HARAVFKLRE SLWKYQR
//
