ID A0A1N7J093_9BACI Unreviewed; 149 AA.
AC A0A1N7J093;
DT 15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT 15-MAR-2017, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=RNA polymerase sigma factor SigS {ECO:0000256|ARBA:ARBA00021245};
GN ORFNames=SAMN05421687_103109 {ECO:0000313|EMBL:SIS42802.1};
OS Salimicrobium flavidum.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Salimicrobium.
OX NCBI_TaxID=570947 {ECO:0000313|EMBL:SIS42802.1, ECO:0000313|Proteomes:UP000187608};
RN [1] {ECO:0000313|EMBL:SIS42802.1, ECO:0000313|Proteomes:UP000187608}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 23127 {ECO:0000313|EMBL:SIS42802.1,
RC ECO:0000313|Proteomes:UP000187608};
RA Mah S.A., Swanson W.J., Moy G.W., Vacquier V.D.;
RL Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Sigma factors are initiation factors that promote the
CC attachment of RNA polymerase to specific initiation sites and are then
CC released. Sigma-S contributes to the protection against external
CC stress, thus playing a role in cellular fitness and survival.
CC {ECO:0000256|ARBA:ARBA00024701}.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family.
CC {ECO:0000256|ARBA:ARBA00007788}.
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DR EMBL; FTOC01000003; SIS42802.1; -; Genomic_DNA.
DR RefSeq; WP_076557604.1; NZ_FTOC01000003.1.
DR AlphaFoldDB; A0A1N7J093; -.
DR STRING; 570947.SAMN05421687_103109; -.
DR OrthoDB; 2968094at2; -.
DR Proteomes; UP000187608; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF00196; GerE; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR PRINTS; PR00038; HTHLUXR.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000313|EMBL:SIS42802.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 9..71
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 97..141
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|Pfam:PF00196"
SQ SEQUENCE 149 AA; 17758 MW; 032F3D165D89AAD0 CRC64;
MDINSFPEYY GLVAEVLNRL NIPSPHEDEL QEAYFIYHKC VENYDPSLSK FSTYYYQELK
YHFRSVLRKA KHREQLLKKI MVLYPSSHID HYFLQPPLDE REAQIYHFSM EGYSTSDIAS
LLSISKSTVL RERKKLQRKF STYVSTPSD
//
