ID   A0A1N7NV38_9FLAO        Unreviewed;       338 AA.
AC   A0A1N7NV38;
DT   15-MAR-2017, integrated into UniProtKB/TrEMBL.
DT   15-MAR-2017, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   RecName: Full=RNA ligase (ATP) {ECO:0000256|ARBA:ARBA00012724};
DE            EC=6.5.1.3 {ECO:0000256|ARBA:ARBA00012724};
GN   ORFNames=SAMN05421785_105117 {ECO:0000313|EMBL:SIT02223.1};
OS   Chryseobacterium gambrini.
OC   Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae;
OC   Chryseobacterium group; Chryseobacterium.
OX   NCBI_TaxID=373672 {ECO:0000313|EMBL:SIT02223.1, ECO:0000313|Proteomes:UP000185781};
RN   [1] {ECO:0000313|EMBL:SIT02223.1, ECO:0000313|Proteomes:UP000185781}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 18014 {ECO:0000313|EMBL:SIT02223.1,
RC   ECO:0000313|Proteomes:UP000185781};
RA   Mah S.A., Swanson W.J., Moy G.W., Vacquier V.D.;
RL   Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + (ribonucleotide)n-3'-hydroxyl + 5'-phospho-
CC         (ribonucleotide)m = (ribonucleotide)n+m + AMP + diphosphate.;
CC         EC=6.5.1.3; Evidence={ECO:0000256|ARBA:ARBA00034038};
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DR   EMBL; FTOV01000005; SIT02223.1; -; Genomic_DNA.
DR   RefSeq; WP_076392825.1; NZ_FTOV01000005.1.
DR   AlphaFoldDB; A0A1N7NV38; -.
DR   STRING; 373672.SAMN05421785_105117; -.
DR   OrthoDB; 1060685at2; -.
DR   Proteomes; UP000185781; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003972; F:RNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   Gene3D; 3.30.1490.70; -; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   Gene3D; 1.10.10.1810; RNA ligase; 1.
DR   InterPro; IPR012647; RNA_lig_RNL2.
DR   InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR   InterPro; IPR041948; Rnl1/2_C_sf.
DR   InterPro; IPR040609; Rnl2_C.
DR   NCBIfam; TIGR02307; RNA_lig_RNL2; 1.
DR   Pfam; PF09414; RNA_ligase; 1.
DR   Pfam; PF18043; T4_Rnl2_C; 1.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Ligase {ECO:0000256|ARBA:ARBA00022598, ECO:0000313|EMBL:SIT02223.1};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT   DOMAIN          30..222
FT                   /note="RNA ligase"
FT                   /evidence="ECO:0000259|Pfam:PF09414"
FT   DOMAIN          249..323
FT                   /note="RNA ligase 2 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF18043"
SQ   SEQUENCE   338 AA;  39496 MW;  804E1C57480516F0 CRC64;
     MIFKTYNSIE NAYQNRVIDQ IRIQGFWDEI FIVQEKVHGA NFSFFTDGKE IKIGKRTAFI
     EKDEKFFNAH QILERYRKNV IEVFEKVKNI HPYVETVIIY GELFGGGYKH KEVEPVKDAV
     KVQKGVEYAP NNEFYAFDIK LNGTTYLDTD VVNEIFEETG FFYAKILYQG TLEDALKFPN
     VFDSKIPGWL GLPEIENNMC EGTIIKTLKT RYFGNGSRVI LKNKNEKWIE KSKVVRKQEK
     TVQKQISFSE KAQNIWEEIQ KYATANRLNN VVSKIGEFEP KMVGKVIGLF AQDILEDFEK
     DFPKVFTTIE KEEQKRINKK LNSLVIDVIK EELMTLKV
//