ID A0A1P8AMF8_ARATH Unreviewed; 401 AA.
AC A0A1P8AMF8;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=RING/U-box superfamily protein {ECO:0000313|EMBL:ANM57832.1};
GN OrderedLocusNames=At1g47570 {ECO:0000313|Araport:AT1G47570,
GN ECO:0000313|EMBL:ANM57832.1};
GN ORFNames=F16N3.15 {ECO:0000313|EMBL:ANM57832.1}, F16N3_15
GN {ECO:0000313|EMBL:ANM57832.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM57832.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:ANM57832.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002684; ANM57832.1; -; Genomic_DNA.
DR RefSeq; NP_001320313.1; NM_001333277.1.
DR AlphaFoldDB; A0A1P8AMF8; -.
DR SMR; A0A1P8AMF8; -.
DR ProteomicsDB; 215931; -.
DR EnsemblPlants; AT1G47570.3; AT1G47570.3; AT1G47570.
DR GeneID; 841166; -.
DR Gramene; AT1G47570.3; AT1G47570.3; AT1G47570.
DR Araport; AT1G47570; -.
DR TAIR; AT1G47570; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; A0A1P8AMF8; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR CDD; cd16503; RING-HC_CHFR; 1.
DR Gene3D; 3.30.40.140; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR040909; CHFR_Znf-CRD.
DR InterPro; IPR018957; Znf_C3HC4_RING-type.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR16079:SF4; E3 UBIQUITIN-PROTEIN LIGASE CHFR; 1.
DR PANTHER; PTHR16079; UBIQUITIN LIGASE PROTEIN CHFR; 1.
DR Pfam; PF00097; zf-C3HC4; 1.
DR Pfam; PF17979; zf-CRD; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1P8AMF8,
KW ECO:0007829|ProteomicsDB:A0A1P8AMF8};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 138..183
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 401 AA; 45257 MW; 02D7DD2D6B14E987 CRC64;
MTTTAETGQS SGSKPSDDDA WAKLVPLDTR FSDIEIRCND MVICSEIKPS SLEKHEWCRI
TKNLGQSSAT IHNKSSDAIL VDKAVVPKDG AVDIISGSEI VPGPEEQGYL QYRFTIMPAP
ESRTQLLQIS IDPEHAKCSI CLNIWHDVVT AAPCLHNFCN GCFSEWMRRS EEKHKHVLCP
QCRTTVQYVG KNHFLKNIQE EILKVDAALR RPAEDIAVLD SSASIQSNLI IGSKRKRRLN
MPAPTHEERD SLRLQCPQCV ANIGGYRCEH HGAHLQCHLC QGMMPFRANL QVPLHCKGCD
RPFCGAYWSS ENVTQGVSGP VCVRETFRPI SERTITRIPF ITHEMNRHEQ DITQRCIAHM
EKTVPDVVAE WLRLFNNREI DRSRMPLNHA ETITASTHVC K
//
