ID A0A1P8ASW8_ARATH Unreviewed; 388 AA.
AC A0A1P8ASW8;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=Tubby like protein 6 {ECO:0000313|EMBL:ANM59752.1};
GN Name=TLP6 {ECO:0000313|EMBL:ANM59752.1, ECO:0000313|TAIR:AT1G47270};
GN Synonyms=AtTLP6 {ECO:0000313|EMBL:ANM59752.1}, tubby like protein 6
GN {ECO:0000313|EMBL:ANM59752.1};
GN OrderedLocusNames=At1g47270 {ECO:0000313|Araport:AT1G47270,
GN ECO:0000313|EMBL:ANM59752.1};
GN ORFNames=F8G22.1 {ECO:0000313|EMBL:ANM59752.1}, F8G22_1
GN {ECO:0000313|EMBL:ANM59752.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM59752.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:ANM59752.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the TUB family. {ECO:0000256|ARBA:ARBA00007129}.
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DR EMBL; CP002684; ANM59752.1; -; Genomic_DNA.
DR RefSeq; NP_001322089.1; NM_001333268.1.
DR AlphaFoldDB; A0A1P8ASW8; -.
DR SMR; A0A1P8ASW8; -.
DR EnsemblPlants; AT1G47270.3; AT1G47270.3; AT1G47270.
DR GeneID; 841130; -.
DR Gramene; AT1G47270.3; AT1G47270.3; AT1G47270.
DR Araport; AT1G47270; -.
DR TAIR; AT1G47270; TLP6.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; A0A1P8ASW8; baseline and differential.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR CDD; cd22153; F-box_AtTLP-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR025659; Tubby-like_C.
DR InterPro; IPR000007; Tubby_C.
DR InterPro; IPR018066; Tubby_C_CS.
DR PANTHER; PTHR16517:SF104; TUBBY-LIKE F-BOX PROTEIN 6; 1.
DR PANTHER; PTHR16517; TUBBY-RELATED; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF01167; Tub; 1.
DR PRINTS; PR01573; SUPERTUBBY.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF54518; Tubby C-terminal domain-like; 1.
DR PROSITE; PS01200; TUB_1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 44..87
FT /note="F-box"
FT /evidence="ECO:0000259|Pfam:PF12937"
FT DOMAIN 105..383
FT /note="Tubby C-terminal"
FT /evidence="ECO:0000259|Pfam:PF01167"
SQ SEQUENCE 388 AA; 43340 MW; 00EA4D1BEF90BA30 CRC64;
MSLKNIVKNK YKAIGRRGRS HIAPEGSSVS SSLSTNEGLN QSIWVDLPPE LLLDIIQRIE
SEQSLWPGRR DVVACASVCK SWREMTKEVV KVPELSGLIT FPISLRQPGP RDAPIQCFIK
RERATGIYRL YLGLSPALSG DKSKLLLSAK RVRRATGAEF VVSLSGNDFS RSSSNYIGKL
RSNFLGTKFT VYENQPPPFN RKLPPSMQVS PWVSSSSSSY NIASILYELN VLRTRGPRRM
QCIMHSIPIS AIQEGGKIQS PTEFTNQGKK KKKPLMDFCS GNLGGESVIK EPLILKNKSP
RWHEQLQCWC LNFKGRVTVA SVKNFQLVAA AAEAGKNMNI PEEEQDRVIL QFGKIGKDIF
TMDYRYPISA FQAFAICLSS FDTKPVCE
//
