ID A0A1P8ATT9_ARATH Unreviewed; 534 AA.
AC A0A1P8ATT9;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Tetratricopeptide repeat (TPR)-like superfamily protein {ECO:0000313|EMBL:ANM60058.1};
GN OrderedLocusNames=At1g34160 {ECO:0000313|Araport:AT1G34160,
GN ECO:0000313|EMBL:ANM60058.1};
GN ORFNames=F12G12.2 {ECO:0000313|EMBL:ANM60058.1}, F12G12_2
GN {ECO:0000313|EMBL:ANM60058.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM60058.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:ANM60058.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CP002684; ANM60058.1; -; Genomic_DNA.
DR RefSeq; NP_001322370.1; NM_001333088.1.
DR AlphaFoldDB; A0A1P8ATT9; -.
DR SMR; A0A1P8ATT9; -.
DR EnsemblPlants; AT1G34160.2; AT1G34160.2; AT1G34160.
DR GeneID; 840315; -.
DR Gramene; AT1G34160.2; AT1G34160.2; AT1G34160.
DR Araport; AT1G34160; -.
DR TAIR; AT1G34160; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; A0A1P8ATT9; baseline and differential.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47924:SF68; DYW DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 3.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1P8ATT9,
KW ECO:0007829|ProteomicsDB:A0A1P8ATT9};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 96..126
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 127..161
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 225..259
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 439..534
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 534 AA; 60233 MW; 9C2AEA8AB0D12D03 CRC64;
MRQLLPNQTT PISLPHRRPF PIFLSPFSSS RTLRNLTIRR PFLRRTNFPQ SSSSSAICRV
DALTCSFTLK ACARALCSSA MDQLHCQINR RGLSADSLLC TTLLDAYSKN GDLISAYKLF
DEMPVRDVAS WNALIAGLVS GNRASEAMEL YKRMETEGIR RSEVTVVAAL GACSHLGDVK
EGENIFHGYS NDNVIVSNAA IDMYSKCGFV DKAYQVFEQF TGKKSVVTWN TMITGFAVHG
EAHRALEIFD KLEDNGIKPD DVSYLAALTA CRHAGLVEYG LSVFNNMACK GVERNMKHYG
CVVDLLSRAG RLREAHDIIC SMSMIPDPVL WQSLLGASEI YSDVEMAEIA SREIKEMGVN
NDGDFVLLSN VYAAQGRWKD VGRVRDDMES KQVKKIPGLS YIEAKGTIHE FYNSDKSHEQ
WREIYEKIDE IRFKIREDGY VAQTGLVLHD IGEEEKENAL CYHSEKLAVA YGLMMMDGAD
EESPVRVINN LRICGDCHVV FKHISKIYKR EIIVRDRVRF HRFKDGSCSC RDFW
//
