ID A0A1P8B338_ARATH Unreviewed; 196 AA.
AC A0A1P8B338;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Ubiquitin fusion degradation UFD1 family protein {ECO:0000313|EMBL:ANM63316.1};
GN OrderedLocusNames=At2g29070 {ECO:0000313|Araport:AT2G29070,
GN ECO:0000313|EMBL:ANM63316.1};
GN ORFNames=T9I4.15 {ECO:0000313|EMBL:ANM63316.1}, T9I4_15
GN {ECO:0000313|EMBL:ANM63316.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM63316.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:ANM63316.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002685; ANM63316.1; -; Genomic_DNA.
DR RefSeq; NP_001325410.1; NM_001336197.1.
DR AlphaFoldDB; A0A1P8B338; -.
DR SMR; A0A1P8B338; -.
DR ProteomicsDB; 201650; -.
DR EnsemblPlants; AT2G29070.3; AT2G29070.3; AT2G29070.
DR GeneID; 817455; -.
DR Gramene; AT2G29070.3; AT2G29070.3; AT2G29070.
DR KEGG; ath:AT2G29070; -.
DR Araport; AT2G29070; -.
DR TAIR; AT2G29070; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; A0A1P8B338; baseline and differential.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
DR Gene3D; 3.10.330.10; -; 1.
DR InterPro; IPR004854; Ufd1-like.
DR PANTHER; PTHR12555:SF21; UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG; 1.
DR PANTHER; PTHR12555; UBIQUITIN FUSION DEGRADATON PROTEIN 1; 1.
DR Pfam; PF03152; UFD1; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1P8B338,
KW ECO:0007829|ProteomicsDB:A0A1P8B338};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..17
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 18..196
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010187861"
FT REGION 63..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..94
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 112..139
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 140..159
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 160..179
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 196 AA; 21793 MW; BADDCE36ABE5D992 CRC64;
MCFLSFLFCS LETTLRSYSC LTTGDTIMVP YNNKQYYINV VEAKPSSAVS IIETDCEVDF
APPLDYKEPE KPQKLTPSNK RPLQVKEEEE PASKVPKFTP FTGSGKRLDG KAQTQTEPED
TKQQEKPTEN GKDDEKLSVT TPRQISGKLV FGSNSKSAAK ETAKVDDPKN IVQESSTKSD
EAKFKVFTGK KYSLNG
//
