ID A0A1P8B9R2_ARATH Unreviewed; 656 AA.
AC A0A1P8B9R2;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 13-SEP-2023, entry version 29.
DE SubName: Full=Rad21/Rec8-like family protein {ECO:0000313|EMBL:ANM68328.1};
GN Name=SYN2 {ECO:0000313|EMBL:ANM68328.1, ECO:0000313|TAIR:AT5G40840};
GN Synonyms=AtRAD21.1 {ECO:0000313|EMBL:ANM68328.1}, MHK7.7
GN {ECO:0000313|EMBL:ANM68328.1}, MHK7_7 {ECO:0000313|EMBL:ANM68328.1};
GN OrderedLocusNames=At5g40840 {ECO:0000313|Araport:AT5G40840,
GN ECO:0000313|EMBL:ANM68328.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:ANM68328.1, ECO:0000313|Proteomes:UP000006548};
RN [1] {ECO:0000313|EMBL:ANM68328.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130714; DOI=10.1038/35048507;
RG Kazusa DNA Research Institute;
RG Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG European Union Arabidopsis Genome Sequencing Consortium;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T., Entian K.D.,
RA Terryn N., Hartley N., Bent E., Johnson S., Langham S.A., McCullagh B.,
RA Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H.,
RA Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Lankhorst R.K., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S.,
RA Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J.,
RA Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K., Rudd S., Schoof H.,
RA Schueller C., Zaccaria P., Mewes H.W., Bevan M., Fransz P.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; CP002688; ANM68328.1; -; Genomic_DNA.
DR RefSeq; NP_001330092.1; NM_001344361.1.
DR AlphaFoldDB; A0A1P8B9R2; -.
DR SMR; A0A1P8B9R2; -.
DR ProteomicsDB; 252127; -.
DR EnsemblPlants; AT5G40840.5; AT5G40840.5; AT5G40840.
DR GeneID; 834084; -.
DR Gramene; AT5G40840.5; AT5G40840.5; AT5G40840.
DR Araport; AT5G40840; -.
DR TAIR; AT5G40840; SYN2.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; A0A1P8B9R2; baseline and differential.
DR GO; GO:0008278; C:cohesin complex; IEA:InterPro.
DR GO; GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
DR CDD; cd21793; Rad21_Rec8_M_AtSYN1-like; 1.
DR Gene3D; 1.10.10.580; Structural maintenance of chromosome 1. Chain E; 1.
DR InterPro; IPR039781; Rad21/Rec8-like.
DR InterPro; IPR006909; Rad21/Rec8_C_eu.
DR InterPro; IPR023093; ScpA-like_C.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR12585; SCC1 / RAD21 FAMILY MEMBER; 1.
DR PANTHER; PTHR12585:SF73; SISTER CHROMATID COHESION 1 PROTEIN 2; 1.
DR Pfam; PF04824; Rad21_Rec8; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1P8B9R2,
KW ECO:0007829|ProteomicsDB:A0A1P8B9R2};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 599..651
FT /note="Rad21/Rec8-like protein C-terminal eukaryotic"
FT /evidence="ECO:0000259|Pfam:PF04824"
FT REGION 44..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 120..162
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 453..473
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..86
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..156
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 453..472
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 656 AA; 74038 MW; 65483FD60CA2EC85 CRC64;
MDMYSMERFD MEEDLLFTFH ETFSTNHNEN KHESFAHDME LDAENVRDTT EEASVRVVEA
EPLDSNEPSR DHQNASRHRE DPESDDILLE PQMSEDIRIA QEEDTVRETI CTIVQRLVDS
HESSGDNLHR DGHTENLESE KTSKKTSCEE MQHDRSLPSE CGIPEAIHGI EDQPSGATRI
NGEKEIPEMS TLEKPEPVSV TGSRDLQEGV EKCRDHNEAE MADFELFHGS HKEQSETSEV
NLHGSEKGFL SDMTVSKDPS SEFNATDTPV TVTPKTPSRL KISEGGTSPQ FSIIPTPAAK
ESSRVSRKRK CLIDDEVIIP NKVMKEMIED SSKLLAKRRN VPHTDCPERR TKRFANPFRS
FLEPLIQYGS SDLQSLFCQP IKLKNWATTG TPKDTKIARH KEKSSLDTVR SPGVILSSDQ
TENTQEIMET PQAAALAGLK VTAGNSNVVS VEMGASSTTS GTAHQTENAA ETPVKPSVIA
PETPVRTSEQ TVIAPETPVV SEQVEIAPET PVRESMSKRF FKDPGTCYKK SRPASPFTSF
EEHPSVYYVE NRDLDTILMN DEVNADERQD LQQETWSSRT RNVAKFLEKT FLEQREREEE
EKVSLLQLCR GRTQKESARL FYETLVLKTK GYVEVKQNHP YSDVFLMRVS RPQKAC
//
