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Database: UniProt
Entry: A0A1P8V0E7_9RHOB
LinkDB: A0A1P8V0E7_9RHOB
Original site: A0A1P8V0E7_9RHOB 
ID   A0A1P8V0E7_9RHOB        Unreviewed;       553 AA.
AC   A0A1P8V0E7;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   27-SEP-2017, entry version 4.
DE   RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN   ORFNames=Ga0080574_TMP4777 {ECO:0000313|EMBL:APZ55111.1};
OS   Pelagibaca abyssi.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Pelagibaca.
OX   NCBI_TaxID=1250539 {ECO:0000313|EMBL:APZ55111.1, ECO:0000313|Proteomes:UP000187059};
RN   [1] {ECO:0000313|EMBL:APZ55111.1, ECO:0000313|Proteomes:UP000187059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JLT2014 {ECO:0000313|EMBL:APZ55111.1,
RC   ECO:0000313|Proteomes:UP000187059};
RA   Tang K.;
RT   "Deep-sea bacteria in the southern Pacific.";
RL   Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the
CC       initiation point. It is needed to translate mRNA with a short
CC       Shine-Dalgarno (SD) purine-rich sequence.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000256|PIRNR:PIRNR002111}.
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DR   EMBL; CP015093; APZ55111.1; -; Genomic_DNA.
DR   KEGG; paby:Ga0080574_TMP4777; -.
DR   KO; K02945; -.
DR   Proteomes; UP000187059; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   TIGRFAMs; TIGR00717; rpsA; 1.
DR   PROSITE; PS50126; S1; 6.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000187059};
KW   Reference proteome {ECO:0000313|Proteomes:UP000187059};
KW   Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW   Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW   ECO:0000313|EMBL:APZ55111.1};
KW   RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT   DOMAIN       20     86       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      104    170       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      191    259       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      276    346       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      363    433       S1 motif. {ECO:0000259|PROSITE:PS50126}.
FT   DOMAIN      450    518       S1 motif. {ECO:0000259|PROSITE:PS50126}.
SQ   SEQUENCE   553 AA;  60766 MW;  96114B715AEE3FC7 CRC64;
     MEEFEALLNE SLEMDTPDEG TVVKGKVIAI EAGQAIIDVG YKMEGRVELK EFANPGEAPD
     ITVGDEVEVY LRAAENARGE AVISREMARR EEAWDRLEKA YADDARVEGA IFGRVKGGFT
     VDLGGAVAFL PGSQVDVRPV RDAGPLMGLK QPFQILKMDR RRGNIVVSRR AILEESRAEQ
     RAEVISNLSE GQTVDGVVKN ITEYGAFVDL GGVDGLLHVT DMAWRRVNHP SEILSIGETV
     KVQVIKINKE THRISLGMKQ LQEDPWDLVA VKFPLGSVHK GRVTNITDYG AFVELEPGVE
     GLVHVSEMSW TKKNVHPGKI VSTSQEVDVM VLEIDPAKRR VSLGLKQTMR NPWEVFSETH
     PEGTQVEGEV KNITEFGLFI GLDGEIDGMV HLSDLSWDQR GEEAIQEYRK GDVVQAVVTE
     VDTDKERISL SIKALGGDKF ADAVGGVKRG SIVTVEVTAI EDGGIEVEYE GMKSFIRRSD
     LSRDRAEQRP ERFSVGDKID VRVTNIDSKT RRLGLSIKAR EIAEEKEAVE QYGSSDSGAS
     LGDILGAALK GDN
//
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