ID A0A1Q3DYA4_LENED Unreviewed; 1802 AA.
AC A0A1Q3DYA4;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Mitochondrial DNA polymerase catalytic subunit {ECO:0000256|ARBA:ARBA00031966};
GN ORFNames=LENED_001386 {ECO:0000313|EMBL:GAV99900.1};
OS Lentinula edodes (Shiitake mushroom) (Lentinus edodes).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Marasmiineae; Omphalotaceae; Lentinula.
OX NCBI_TaxID=5353 {ECO:0000313|EMBL:GAV99900.1, ECO:0000313|Proteomes:UP000188533};
RN [1] {ECO:0000313|EMBL:GAV99900.1, ECO:0000313|Proteomes:UP000188533}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 111202 {ECO:0000313|EMBL:GAV99900.1,
RC ECO:0000313|Proteomes:UP000188533};
RG Lentinula edodes genome sequencing consortium;
RA Sakamoto Y., Nakade K., Sato S., Yoshida Y., Miyazaki K., Natsume S.,
RA Konno N.;
RL Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:GAV99900.1, ECO:0000313|Proteomes:UP000188533}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 111202 {ECO:0000313|EMBL:GAV99900.1,
RC ECO:0000313|Proteomes:UP000188533};
RA Sakamoto Y., Nakade K., Sato S., Yoshida Y., Miyazaki K., Natsume S.,
RA Konno N.;
RT "A genome survey and senescence transcriptome analysis in Lentinula
RT edodes.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAV99900.1}.
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DR EMBL; BDGU01000021; GAV99900.1; -; Genomic_DNA.
DR STRING; 5353.A0A1Q3DYA4; -.
DR Proteomes; UP000188533; Unassembled WGS sequence.
DR GO; GO:0005760; C:gamma DNA polymerase complex; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR Gene3D; 3.30.420.390; -; 2.
DR Gene3D; 3.30.70.370; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR InterPro; IPR002297; DNA-dir_DNA_pol_A_mt.
DR InterPro; IPR001098; DNA-dir_DNA_pol_A_palm_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041336; DNApol_Exo.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR PANTHER; PTHR10267; DNA POLYMERASE SUBUNIT GAMMA-1; 1.
DR PANTHER; PTHR10267:SF0; DNA POLYMERASE SUBUNIT GAMMA-1; 1.
DR Pfam; PF00476; DNA_pol_A; 1.
DR Pfam; PF18136; DNApol_Exo; 1.
DR PRINTS; PR00867; DNAPOLG.
DR SMART; SM00482; POLAc; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF52047; RNI-like; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1378..1611
FT /note="DNA-directed DNA polymerase family A palm"
FT /evidence="ECO:0000259|SMART:SM00482"
FT REGION 556..591
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 966..999
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 556..583
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 966..980
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1802 AA; 201147 MW; 230B74328BC2D3DA CRC64;
MSSEASTSRV CETTKLPGYR RRGLRSLSTL LQIPLLGSRA ENRFNIPVAG GLPADILYEV
SEYLWSSDLL SLSLTSSHVR ALLLPVLYDT VVLKSSRACR TALTMLFERP DICRYIRKLA
VRPNYYLAWP KANERLDEDW VVDMLLKIAE NMALLHTFDW DGLEMPNDRL WIALRNECPL
LKTVYTNIGY QPLNPDSDLF DFTDLTSFSL TVRHSLEETD LFPEQELLPE RLWDMLLTKC
PNMQDLTLSS FSSSTRLLNV DRLCTAEANW PKLHSLTLGS FGYNDDFELN SPSDDAAFGA
FLSKHTELKY LRLSWNFKRW MSPETIPLSL EPTALPQLST FVGVHQQLAV LPQPALSSIE
ILDLTCEPLF AGRLDGVGGV CSTLAKLSAL TSLDLWLHIP EFKDHSTFFK GLMEACPKLT
ELHFMCTTSF GVKPLLCLAA HLPLLPHLRT FSLTKGHKYV GDDSSMLRTV LRILRASTKS
KSGISSNPNP ELRQVNIRWA KEKCPNHLKQ EGTYDVVRRW NADHTSVVVA VEVYEKGITA
LGKVFTRRYR YNNFSTPSRS LSSTPTTIST STPSASSSSN DTSDDRRSSG RVARGRFRKA
LMLIQNKKSS SLVDLMYDHH ESLSQRCLSN MALPLTAFKY KEEKVVKAKT KDDAQKLRHV
KRNAAGVQML SRSLHEQIFK NCTFPSPPKT YTNISLEHLK THGLDPTQSS TLPSTDFILP
PLQGNNLLEH FHRIGVSSSQ PYISFAKQFA EAELPPIPDD WQLQAGWTKY HHSSDGSGYC
EHVAFPSHDG KSEIMLAFDV ETMPKYHQYP ILACAASPNA WYVWISPWIL DPSSNSPEHL
IPLGPPDVSR LVVGHNVSYD RARIQEEYHL AGTKNRFLDT MSLHVAIKGI SSHQRPAWAK
YRKEKQDAIE SRDEAIEAVI HLLHDVEQQL KGLREAVASG LVDDRGEVQK LVDLQSNLEE
SLSGLKITQS ASSDTNQPDP LLTDADLDDE PSIETSQKRW EDITSGNSLV DVAKLHCDID
ISKEIRNDFM TATPLEILES INDYISYCAT DVGTTHAVYK KVLPGFLQAC PHPVSFAGVA
TMGSGFLPVN EQWEAYIDRA ERVWQNLEGK VRTGLENLAR AAIAEYKVTS PDAPVVGPWQ
DDVWLNQMDW TPKVAGKTRG VYPPGEQPSL LPQQTLRQTH YHPEGCPGKD FLLFSRASMD
SAIRERLQRS SPLSFYHSDD EHLANAASYV FYKLPHKDGE SANVGSPLAK SFLRFAMDGV
LKSSAGDELK ELVDVGVKCS YWISARDRIL NQMVKWDEKS SDMGFPDIPT NQSPEEFKSQ
QKELAEVAAA LGEEFVETPR AKKWGIIVPQ VITMGTVTRR AIERTWLTAS NAKKNRVGSE
LKAMVRAPPG YAIVGADVDS EELWISSCMG DAQFGMHGAT AIGWMTLEGT KSAGTDLHSK
TASILGISRD QAKVFNYSRI YGAGMRHAML LLQQGNSNMS QEEAQKLAEN LYASTKGKNT
HRSDLFGKKF WYGGTESYLF NKLEEIALSD KPQTPALGCG VTHALQKDCL PAGFGSDYMP
SRINWVVQSS GVDYLHLLIV SMDYLIQKYD IGARYLISVH DELRYLVKEE DRFRAALALQ
IANLWTRSMF AYKLGLDDLP QGVAFFSAVD VDGVLRKEVD MTCVTPSQPI PIPPGESLDI
GDVLTRTNGG SLWADGRPME SSSAETTLEG SLDGYVEAQC LTHRADNAAF LRAQATSDLG
EVKHLAKQFQ GKTFEAKLKS VAAGNRNRAS KHRKSVPVGD GEGVDWSEIV ERLLRSGREL
VQ
//
