ID A0A1Q3GGU6_9BACT Unreviewed; 1447 AA.
AC A0A1Q3GGU6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=PAS domain S-box protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BKI52_41615 {ECO:0000313|EMBL:OJJ14736.1};
OS marine bacterium AO1-C.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae.
OX NCBI_TaxID=1905359 {ECO:0000313|EMBL:OJJ14736.1, ECO:0000313|Proteomes:UP000186474};
RN [1] {ECO:0000313|EMBL:OJJ14736.1, ECO:0000313|Proteomes:UP000186474}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AO1-C {ECO:0000313|EMBL:OJJ14736.1};
RA Buerger P., Wood-Charlson E.M., Weynberg K.D., Willis B., Van Oppen M.J.;
RT "CRISPR-Cas defence system in Roseofilum reptotaenium: evidence of a
RT bacteriophage-cyanobacterium arms race in the coral black band disease.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJJ14736.1}.
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DR EMBL; MLAY01000021; OJJ14736.1; -; Genomic_DNA.
DR STRING; 1905359.BKI52_41615; -.
DR Proteomes; UP000186474; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00130; PAS; 5.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 6.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013655; PAS_fold_3.
DR NCBIfam; TIGR00229; sensory_box; 6.
DR PANTHER; PTHR24422:SF10; BLR0923 PROTEIN; 1.
DR PANTHER; PTHR24422; CHEMOTAXIS PROTEIN METHYLTRANSFERASE; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF13426; PAS_9; 6.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00086; PAC; 6.
DR SMART; SM00091; PAS; 6.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 6.
DR PROSITE; PS50113; PAC; 6.
DR PROSITE; PS50112; PAS; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000186474};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 313..331
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 701..753
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 764..803
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 823..875
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 980..1032
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1040..1073
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 1102..1154
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1203..1256
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 1259..1311
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1326..1379
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 1381..1433
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT COILED 594..628
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1142..1190
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1447 AA; 165328 MW; 42A1FC6FA8C13564 CRC64;
MKRRFKFTAA QWLIIRASVI GVILLIGITI AFIAYLETNQ KKNSLDVLKA VRTAKKQQVE
SFYDNLREDA RVYATLDVVT HGFSQLSQAF YQGGINAPSY RLADSAYRLK LDALLGAQRY
DDLYLVTNRG DVVFSVRQQE DFSTNIARGA YRNQMIHQAF NNGKTSTFLT DLSNYKLVGS
KLPMGFAAAP VFDEKGVRLG VLILRYSVKS VNKILARNIL QNNALNPRIF IIGQDFLVRA
TSLPEDYSQL LEKKSADQAS RAALDTKGSV EVTDDNFTTV GDYLYIKDLD WHLMVALPND
SVRQGLTLIE SEILIIVFII ILFFVGVLYF YNRTLKKPVV VVKEVISDLS HGVLPNTQLE
SKHDDIQIQG TINNLVDGLK KTSHFASEIG KGNLEVEFNP LSENDELGNA LLGMRNNLRQ
VAVEDKKRNW TTEGLAKFGE ILRSNNDNVA ELSYSIIANL VDYVGANQGG LFRLNDEDKH
DVHLELIAAY AFQTQKFHTK RIKVGEGLVG EAVREKRTIY MTDVPNEYVR ITSGLGEANP
RSVLVVPMKV NDQIHGVIEI ASFMTYDAYQ IEFIEKLAES IASTIASVKV NEHTKKLVQQ
LRTSEEEIRQ NMEELHATQE QMETKEIELT GQLDAINSTL STIEFDAEGY VMAANDIFLE
VTEYTLDNIV RQPHTIFVDE EYANSVEYKQ FWLDLKKGLS KSGEYKYQTN LGKDVWLNAT
YTPVKDSVGA IYKIIALATN ITEQKKMALD FEGQLAAIYK SNMVVEYDMQ GRVVYANDDF
LKLLGYDLDE VQEQPHTIFI PEEDHESKKL QEFWSDLRRG NYQADAVRRI TKSGKIIWTR
GSFNPILDLS GQPYKIVEFT QDITYHRELQ AKTAEQLESI QVKEKELTEN VEKLNAIQEE
MVVKEADMAA HLNAIDRTLA TVEYDLRGFI QKANRQYLQI MGYTMEELDG QHDKILVDPV
EAEGEDYQSF WKSLKRDGER SGEFRRISKS GKEIWWQATF TLAFTSKRKP YKVIMLARDI
TEQKLASLDI EGQLKAIHKS NGVMEIDIEG HILSINETYL EALGYTEEEV LGQLHTIFIE
EKERHSTEFT AFWMDLVHGR FKTGVFEKIT KDGTTRWFRG SYNPIFDLKG KAYKVVHFAQ
DITQAKQLEI EALQQAEELR TQEEEIRQNM EELTAVQEDM KRNSMEMEAA LAAIDHTLAT
AELDLSGTFM KVNTIFAELV GFKVDELIGK NFKMLVPPKY AKTEEYEILW DKLNNGLAQE
GEIKFITKDH QEVWASVTYT PAKNSYGTIY KILILVNDIS ELKHVTLDFE GMLSAFNQAS
LMAEYDLNGM ITNINDRFLD LMHYERGEVL GKHHKIFVKE QEKKSKKYKD FWQHILKGNH
QNGDFLRIDH DGNEKWLRGS YHPIVDASGK PYKIVNYAMD VTEYKQAILD MEAHIANHQK
NGKSEGK
//
