ID A0A1Q3H1Y6_9BACT Unreviewed; 1198 AA.
AC A0A1Q3H1Y6;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=PAS domain S-box protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=BKI52_00680 {ECO:0000313|EMBL:OJJ22899.1};
OS marine bacterium AO1-C.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae.
OX NCBI_TaxID=1905359 {ECO:0000313|EMBL:OJJ22899.1, ECO:0000313|Proteomes:UP000186474};
RN [1] {ECO:0000313|EMBL:OJJ22899.1, ECO:0000313|Proteomes:UP000186474}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AO1-C {ECO:0000313|EMBL:OJJ22899.1};
RA Buerger P., Wood-Charlson E.M., Weynberg K.D., Willis B., Van Oppen M.J.;
RT "CRISPR-Cas defence system in Roseofilum reptotaenium: evidence of a
RT bacteriophage-cyanobacterium arms race in the coral black band disease.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJJ22899.1}.
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DR EMBL; MLAY01000001; OJJ22899.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Q3H1Y6; -.
DR STRING; 1905359.BKI52_00680; -.
DR Proteomes; UP000186474; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 7.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 7.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR013655; PAS_fold_3.
DR NCBIfam; TIGR00229; sensory_box; 7.
DR PANTHER; PTHR24422:SF10; BLR0923 PROTEIN; 1.
DR PANTHER; PTHR24422; CHEMOTAXIS PROTEIN METHYLTRANSFERASE; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08447; PAS_3; 3.
DR Pfam; PF13426; PAS_9; 3.
DR SMART; SM00086; PAC; 6.
DR SMART; SM00091; PAS; 7.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 7.
DR PROSITE; PS50113; PAC; 6.
DR PROSITE; PS50112; PAS; 7.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000186474}.
FT DOMAIN 238..285
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 314..366
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 356..416
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 436..488
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 540..573
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 593..645
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 653..686
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 713..767
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 817..843
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 872..924
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 935..965
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 992..1046
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 1082..1152
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT COILED 9..36
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 200..241
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 479..517
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 758..803
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 1037..1075
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1198 AA; 137382 MW; BC1400AFAB585B2A CRC64;
MDNGQHTDQE VSMADLEHYK QLVEQLEAES MQMKERLWVD SNLTKFDDVL RSNYDQSLST
FADAVIFHLA KLTQALRGTF FSLNSELNLV QAVAGYACTV ETLPKSEFHI GEGLVGQAIK
GKEIIVLDNI PQHNMVLEAS MGQLSGNCVV VIPLMFNQES YGAVELLYLQ NIEQKYLDLL
ERLSQNIASM LNSIQNNIKT RKLLEDSKEL EKELRTQEEE LRQNMEELHA TQEKMHRKEK
ELSSNINAIN QTMGTVEFDL KGRIMHANPL FLELMDYQMD HLVGKHHRMF LEEENANSPE
YQDFWKNLTL GSTQSGEYLR IGNGGKKIWL RASYTPVKGM DGTPFKIMML AVDITQEREL
RQDLDNQMLA ISKSNAVVEM DVHGIVQKAN SLFLELTGYT TEEIKGKHHR QFVKPKYAES
DEYKEFWEQL KQGKFIEGEF ERVNKEGKRL WIKGSYNPIV DESGKVYKVM KYALDITSQK
VLEFENAEQL EELKAVEEEI RQNMEELVAT QEKMTKKELE LSSNLLAIDY TISSIEFSPE
GIILRANQLF LDLMGYTAEE ITGKHHRLFV TPEYAQSSEY ISFWKDLQQG KSVSSEFKRV
ANNGKEIWLR ATYTPVKDSY GEVLKILKLA MDVTDEKLLH QDFSNQLMAI ERSNAVVEFD
LEGNILEANN NFLDIIGYTQ DEVVGKHHQL FVDANYAKSI EYQQFWNQLR NGQFVEGEFT
RLTKDQREIW IKGSYNPIMG LDNKPYKIVK YALDITNRKQ LEAENAQNLE EVKTVEEELR
QNMEELIATQ DKIQQKEEEL TSNLSAINHT ICKIEFNPEG KILKANQLFL DLMGYTSEEV
AGQHHRMFVD TAYAQSQEYA QFWQKLRNGE SIDSEFKRFG NNGKEVWLRA TYTPVKDASG
VIAKVIKLAL DVTEEKRLRT DIGNQLNAIN RANAVIEFDL QGNILEVNDN FLAVVGYTSE
EVIGKHHQIF VKAADAQSIE YQQFWHQLRN GNPIEGDFER VAKDGNTVWI NGNYNPIIGL
DGKPYKIVKF ASDITERKKL EMSNAQNLEE LKAVEEELRQ NMEELTSTQE ELQKQVAVVD
KSKRQIDAVL TTAIDVIITM DARGIVATIN PAVSDIFGYQ PEEIIGQNVK VLMPDNYASA
HDGYLANYLN TGEKKIIGIG RKVEAQHKDG TVFDAHISVS EFKLDDQQMF TGFIRKLD
//
