ID A0A1Q3Q6S9_9BACT Unreviewed; 493 AA.
AC A0A1Q3Q6S9;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN ORFNames=BGO32_02515 {ECO:0000313|EMBL:OJV30074.1};
OS Bacteroidetes bacterium 37-13.
OC Bacteria; Bacteroidota.
OX NCBI_TaxID=1895921 {ECO:0000313|EMBL:OJV30074.1, ECO:0000313|Proteomes:UP000185627};
RN [1] {ECO:0000313|EMBL:OJV30074.1, ECO:0000313|Proteomes:UP000185627}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=37-13 {ECO:0000313|EMBL:OJV30074.1};
RA Kantor R.S., Huddy R.J., Iyer R., Thomas B.C., Brown C.T., Anantharaman K.,
RA Tringe S., Hettich R.L., Harrison S.T., Banfield J.F.;
RT "Genome-resolved meta-omics ties microbial dynamics to process performance
RT in biotechnology for thiocyanate degradation.";
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OJV30074.1}.
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DR EMBL; MKTC01000008; OJV30074.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Q3Q6S9; -.
DR STRING; 1895921.BGO32_02515; -.
DR Proteomes; UP000185627; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 189..421
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 493 AA; 56192 MW; 6FB7647672E09430 CRC64;
MNKILVSWYA YNNDFMIEQR GNQKRNMGFV NEEGPTFTVH KYFWTSSKFE KHIILNSNLS
KEDKGKINLL KTELNKNFKD HSIEIKDVAI TDPINVSEIF EKLQSLLAEL TDNEIEIFIS
PGTPAMQTAW YLLGTHFKKN ITLFQIRAKE FTKEKVKPEK IVVSLDSSVL PTNIVVAQKT
IEKDKTSKDI LLTESLEPIY ERAKMIARTN DVGCLILGEN GTGKENLAQF IHNNSNRSDK
PFIAVNCAAF SDDLLRSELF GHEKGSFTGA DSKKIGVFEA ANGGTVFLDE IGDISPKMQV
SLLRVLQSKK VQPVGSTKEI DINVRVLAAT NKDIETMCEE DKFRTDLFYR LAVTELKLPA
LRERGKKEVI ALINHFNKLL SNRFQKNDLL KISKEALERL SAYGYKGNVR ELENMFIHFY
TFCDKEINVP DLPKRVSESK SITLTLADNE KQHVLKVFNL NKGNILATSK SLDVHRDTLK
RKLQEYGVRE SKE
//
