ID A0A1Q5PDC4_9BACT Unreviewed; 1097 AA.
AC A0A1Q5PDC4;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=PKD domain-containing protein {ECO:0000259|PROSITE:PS50093};
GN ORFNames=A3841_17970 {ECO:0000313|EMBL:OKL40224.1};
OS Pontibacter flavimaris.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Hymenobacteraceae;
OC Pontibacter.
OX NCBI_TaxID=1797110 {ECO:0000313|EMBL:OKL40224.1, ECO:0000313|Proteomes:UP000186551};
RN [1] {ECO:0000313|EMBL:OKL40224.1, ECO:0000313|Proteomes:UP000186551}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=S10-8 {ECO:0000313|EMBL:OKL40224.1,
RC ECO:0000313|Proteomes:UP000186551};
RA Zhang G., Zhang R.;
RT "Genome sequence of Pontibacter sp. nov., of the family cytophagaceae,
RT isolated from marine sediment of the Yellow Sea, China.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the peptidase S8 family. {ECO:0000256|PROSITE-
CC ProRule:PRU01240, ECO:0000256|RuleBase:RU003355}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OKL40224.1}.
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DR EMBL; LVWA01000005; OKL40224.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Q5PDC4; -.
DR STRING; 1797110.A3841_17970; -.
DR OrthoDB; 9813435at2; -.
DR Proteomes; UP000186551; Unassembled WGS sequence.
DR GO; GO:0004252; F:serine-type endopeptidase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00146; PKD; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 3.40.50.200; Peptidase S8/S53 domain; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000209; Peptidase_S8/S53_dom.
DR InterPro; IPR036852; Peptidase_S8/S53_dom_sf.
DR InterPro; IPR023827; Peptidase_S8_Asp-AS.
DR InterPro; IPR022398; Peptidase_S8_His-AS.
DR InterPro; IPR023828; Peptidase_S8_Ser-AS.
DR InterPro; IPR015500; Peptidase_S8_subtilisin-rel.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR InterPro; IPR026444; Secre_tail.
DR NCBIfam; TIGR04183; Por_Secre_tail; 1.
DR PANTHER; PTHR43399; SUBTILISIN-RELATED; 1.
DR PANTHER; PTHR43399:SF4; TK-SUBTILISIN; 1.
DR Pfam; PF00082; Peptidase_S8; 1.
DR Pfam; PF18911; PKD_4; 1.
DR Pfam; PF18962; Por_Secre_tail; 1.
DR PRINTS; PR00723; SUBTILISIN.
DR SMART; SM00089; PKD; 1.
DR SUPFAM; SSF49299; PKD domain; 1.
DR SUPFAM; SSF52743; Subtilisin-like; 1.
DR PROSITE; PS50093; PKD; 1.
DR PROSITE; PS51892; SUBTILASE; 1.
DR PROSITE; PS00136; SUBTILASE_ASP; 1.
DR PROSITE; PS00137; SUBTILASE_HIS; 1.
DR PROSITE; PS00138; SUBTILASE_SER; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|PROSITE-
KW ProRule:PRU01240};
KW Protease {ECO:0000256|ARBA:ARBA00022670, ECO:0000256|PROSITE-
KW ProRule:PRU01240};
KW Serine protease {ECO:0000256|ARBA:ARBA00022825, ECO:0000256|PROSITE-
KW ProRule:PRU01240}.
FT DOMAIN 961..995
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT ACT_SITE 181
FT /note="Charge relay system"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01240"
FT ACT_SITE 238
FT /note="Charge relay system"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01240"
FT ACT_SITE 394
FT /note="Charge relay system"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01240"
SQ SEQUENCE 1097 AA; 118519 MW; 4C50496422188D1F CRC64;
MFTLISLPKR SLVFLLLLVL YVPLLYGQRP ALDFGAKTIP NRVVYKLKPQ QPGHLRIATD
KSMGQVLQQI GAGKVARKFP EVTAPPVAAM ARKAAPAVDL TLIYELQYAP GHTFEEVQAA
LMATGEVAYV EPLYMREPFH QPNDPAADSI KTTQYYLKQI QAYGGWAVEQ ADTTIVIGIL
DTGFRLTHQD LQGKVKLNHD DPIDGIDNDG DGLVDNYRGW DFADADNDVT DNTAWKGHGT
AVAGVAAGAT NNGLGVAGTG YNAMFLPLKV FSSYPNGPFG GYEAIVHAAN RGCKVINLSW
GGTGYSKFEQ DVINYAALEK DVVIVASGGN TNAFLDLYPA SYDNVISVGG ANNKDVKFKD
HTYSYNIDLI SPSNNIYSTS QSGDDKYGYV GGTSFASPTV AGGAALVRAR FPELNARQVA
ERLRAGTDEI YTLDGNQAYL EMLGTGRLNL KKALKGEDLK SVRCLSFVPS PNQSLVAGST
VTLDASFINY LAPVEGLQVT LTSLSPHVSI TQGSASLGGL GTMASASTRE PFVIKVSKDT
PPNHKIYLRL GYTDGTYSDF QHFPLIINLN FSTLTANNLH LTLNSEGNIG YNGLNMSQGV
GVKYKNGASM LFEGGLILSA DSGKVADNIH NGSWQNSRGF KPIMLTRPYF NTKLADQELR
GLMETKVEGH PEIEVKTVAY AWAGEPDQDY VILEYQLTNR SSEAIPSLHA GLFADWDIGN
YTENKAGWDE ELQLGYAYHA YAPLPYAGIK LLTPEKSPVY HAIDNIGSND STVTVDDGFT
AAEKYKVISK GVSRKRAGGK YGNSISHILG ASALDLAPGQ TKTIAFAVLA GDDLEALRQH
ARAAQQKYKS IKSGPAPEPM AIQTCLAEAV VISPHGGSSF NFYSDTSATK LLATGANYTI
SEATGNNTIY VANADSMYLS KLVPMDVQVL PASAADFRNS TAYARVSKAV LFEDKSENAH
AWQWDFGDGT QSAEQSPAHI YSQPGSYTVT LTVTNILECT RSSYQQVLDV YDVAPTLYPN
PAVGNITLSL TGPPTESRDS RPELRLTDMA GKTMAAVPMA VSSTTFQYDL SNLRAGVYIA
HIRYQGETFV ERVLVRK
//
