ID A0A1Q7EAC0_9CHLR Unreviewed; 185 AA.
AC A0A1Q7EAC0;
DT 12-APR-2017, integrated into UniProtKB/TrEMBL.
DT 12-APR-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=HTH luxR-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=AUH39_02215 {ECO:0000313|EMBL:OLC10377.1};
OS Chloroflexi bacterium 13_1_40CM_67_9.
OC Bacteria; Chloroflexota.
OX NCBI_TaxID=1805082 {ECO:0000313|EMBL:OLC10377.1, ECO:0000313|Proteomes:UP000187329};
RN [1] {ECO:0000313|EMBL:OLC10377.1, ECO:0000313|Proteomes:UP000187329}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=27843720;
RA Butterfield C.N., Li Z., Andeer P.F., Spaulding S., Thomas B.C., Singh A.,
RA Hettich R.L., Suttle K.B., Probst A.J., Tringe S.G., Northen T., Pan C.,
RA Banfield J.F.;
RT "Proteogenomic analyses indicate bacterial methylotrophy and archaeal
RT heterotrophy are prevalent below the grass root zone.";
RL PeerJ 4:E2687-E2687(2016).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OLC10377.1}.
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DR EMBL; MNEQ01000032; OLC10377.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1Q7EAC0; -.
DR Proteomes; UP000187329; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133:SF51; ECF RNA POLYMERASE SIGMA-E FACTOR; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
FT DOMAIN 23..87
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 121..172
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
SQ SEQUENCE 185 AA; 20719 MW; 8EC6FFAA9259D3A9 CRC64;
MTHTDQDVVR ACLTGDTDAY AILVERYGGR VFNIALRITA DTDAAKDCAQ EAFIRAYRAL
HQYDPALPFG PWLYRITTNA SLNHVQRWHA HQTPVEELPE DPEEIEKGPE ATAVRREELA
EVVAAMEELP AAYRAALALR HMQQLSYQEV ADALGIPLGT VKTHLHRARA ALKVRLAARL
KGRSR
//
