GenomeNet

Database: UniProt
Entry: A0A1Q9C0W8_SYMMI
LinkDB: A0A1Q9C0W8_SYMMI
Original site: A0A1Q9C0W8_SYMMI 
ID   A0A1Q9C0W8_SYMMI        Unreviewed;      5113 AA.
AC   A0A1Q9C0W8;
DT   12-APR-2017, integrated into UniProtKB/TrEMBL.
DT   12-APR-2017, sequence version 1.
DT   22-FEB-2023, entry version 15.
DE   SubName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:OLP76564.1};
GN   ORFNames=AK812_SmicGene43485 {ECO:0000313|EMBL:OLP76564.1};
OS   Symbiodinium microadriaticum (Dinoflagellate) (Zooxanthella
OS   microadriatica).
OC   Eukaryota; Sar; Alveolata; Dinophyceae; Suessiales; Symbiodiniaceae;
OC   Symbiodinium.
OX   NCBI_TaxID=2951 {ECO:0000313|EMBL:OLP76564.1, ECO:0000313|Proteomes:UP000186817};
RN   [1] {ECO:0000313|EMBL:OLP76564.1, ECO:0000313|Proteomes:UP000186817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP2467 {ECO:0000313|EMBL:OLP76564.1,
RC   ECO:0000313|Proteomes:UP000186817};
RA   Aranda M., Li Y., Liew Y.J., Baumgarten S., Simakov O., Wilson M., Piel J.,
RA   Ashoor H., Bougouffa S., Bajic V.B., Ryu T., Ravasi T., Bayer T.,
RA   Micklem G., Kim H., Bhak J., Lajeunesse T.C., Voolstra C.R.;
RT   "Genome analysis of coral dinoflagellate symbionts highlights evolutionary
RT   adaptations to a symbiotic lifestyle.";
RL   Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OLP76564.1}.
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DR   EMBL; LSRX01001988; OLP76564.1; -; Genomic_DNA.
DR   OrthoDB; 1707450at2759; -.
DR   Proteomes; UP000186817; Unassembled WGS sequence.
DR   GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR   CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR   Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 1.
DR   InterPro; IPR001969; Aspartic_peptidase_AS.
DR   InterPro; IPR011761; ATP-grasp.
DR   InterPro; IPR036400; Cyt_B5-like_heme/steroid_sf.
DR   InterPro; IPR010869; DUF1501.
DR   InterPro; IPR014917; DUF1800.
DR   InterPro; IPR003034; SAP_dom.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR43737; BLL7424 PROTEIN; 1.
DR   PANTHER; PTHR43737:SF1; CBM6 DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF13535; ATP-grasp_4; 1.
DR   Pfam; PF07394; DUF1501; 1.
DR   Pfam; PF08811; DUF1800; 2.
DR   SUPFAM; SSF55856; Cytochrome b5-like heme/steroid binding domain; 1.
DR   SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   PROSITE; PS00141; ASP_PROTEASE; 1.
DR   PROSITE; PS50975; ATP_GRASP; 1.
DR   PROSITE; PS50800; SAP; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW   Reference proteome {ECO:0000313|Proteomes:UP000186817};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          575..589
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   DOMAIN          1034..1068
FT                   /note="SAP"
FT                   /evidence="ECO:0000259|PROSITE:PS50800"
FT   DOMAIN          2430..2636
FT                   /note="ATP-grasp"
FT                   /evidence="ECO:0000259|PROSITE:PS50975"
FT   REGION          1..136
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          479..571
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          599..628
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          977..1005
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1169..1196
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1477..1552
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1593..1621
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          2272..2299
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        13..28
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        35..136
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        493..527
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        549..566
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        608..628
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1490..1552
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   5113 AA;  563233 MW;  685D8C8538CBED7E CRC64;
     MCRGVLTSAS SRKRNAPEEE EDFPAMQFGM KRRRNAAEAT AEKKRVEAER RKAAKAAAEK
     KRAEAERRKA EAAEKKRAEA ERRKEAAAEK KRAEAERRKE AAAEKKRAEA ERRKEAAAEK
     KRAEAEKKPL LKRRKRTEQG KEFMVAAGWL EQRGAFGGGS KGFYSGGAGP GVWVSASDIL
     FGSCRWQLVG AWVPTEGEQG YDPGTMDQSF NGPAPADAGA QPDGAAAGGV PLDQVDLVVR
     RRLEQALNGV FGRLLQTTER AAAAAEVQAN VTKSETLLKS IKCEVWRPAS REEELKTWRE
     WWLQFSTWLL AVEPAYEKDL QEMEIDTPVD SDLMDDATLA RSQRLYAVLC SLVKNRPLLI
     VRAYDSTKEG FEALRMLRRE MEPKEKTRSL ALMRRLAAWE FHGGQGLYEQ LIKYEEALKQ
     YETAAGAPFP SELSLATIVT GLHEPLRSQV QMRLTPTTRY QDIREWVLQY ESLNAPWSSS
     LLGGAGNKAR GSKDEAQPMD IDRIKGKDPK GKGKDSKGKK GKAGKNDGYK GWGKWTSKDY
     NTGAGKGKND KNNKGKDSKG KPGKDGKGKG QGNICHLCGQ AGHWKNECPW KASTGAGKHG
     VRQVEETGQG ANPGSSSQST VSTSASAYRT PSTINQIRAA SAVEMSTPPG CKEALVYDMT
     GDDGDLEDFA LEEPGLMMIE AVPVFGQGVP VFFMDATDDD GVWTFAEGAE IEPNEDIHDE
     GPMVISMVRA TGAVEVVVDS GADLSVAPLS YANRGQHAAA PRVIMQDAQG KRIYDKGARN
     LSLEVETGDG GHVVLKERFN IANVGSVILS LGRLLRNGWN LGSEGGQQRI TRDGVSIPVA
     LRRNTLVLSA VIGAISLMDS GPLPPELEEL GGHQGWHILP SGLPVLINNN VSEVPLENSI
     WSQDDWAWVT CFIRKEPATR YPSPGDVWVQ AFTVTTEDFE RMGRTMKEID EELGERHDVV
     LLFHVEEIPK NLLSEPGSFF KDPDLDEPPF LPEGERDTGG GVGADVEDVL GERDLRGHEE
     EGEQDGVLDD VKLSVATPLK ELKLLCDRLG VAKSGSKNKV LKRLRDHRDV MERQLATDVA
     KQLYKDRDRD PVAMKTPVLP SARQQELHAL THQPFAPWCA ACVMGRSRQS PHAGETGANQ
     GGDGVPGPIQ CVLQIDYCYT FTRSKGEEMD VEGANANSGE APTGDDDAPP EAPPDYQDQH
     GLNMVCCEST TGWVMALPLA AKGTTSLKRT TEALTRLSLL IADRDEVVIQ GDPEPSVRQV
     LNAFQACRTK LGLKTIVRET QRGSHASNGA AEKAVSTIRA LARTLKAELE SRLKVEISGH
     MAIYSWLLKH CSFLHNRYFV TSKGLTPFEV VHGKRYVGKL LVFGEQCIYY AGSRYKGDLQ
     WRQGTWVGIN ERNGANIVLT ENGAKESRSI RRLPMESQWA ANAAANALGL PWAYGGKAKR
     KKPIYSSQRV PLLPDAASLE ELARAAGRSA AEAIASSTPL GGIPATPAAP AAGNNNNDEV
     EKQTQFQEQQ VEKQTQFPEQ QVEKRTQFPE QQVEKRTQFP EQQVEKQTQF PQQVVPAVQP
     APWTQVHGDT LTQDEAQWEE WIDEVGAVLD AEHHSEEPEW DEHGDRPPDL SPADLEPLDH
     KSDRAEVERL ISMGALRAPR PEEDIGGYAR LTTKIVRDWR KRPMWVRRSR LVAREFRTWA
     PWTEELFAPS SSLGAVHQLI SIAMAKGLEV TTIDVKDAYL NVPQKAPVVI TVDRSLVEDG
     GVGEAPFILE RLLPGQRVAA AEWFQYVKEM LLEADLENFE KEPTLFRGTG LDDDTNLILH
     ADDGILASTQ KAREKVLGVL KRKVEVKVSD PFGPGCELEF LKRRYLWCSE GATMMSGTKH
     LEGLLNALGH DIKERDAPAD TSFVEEDKGD ELTDSKRKLY QECVGRLLYL SHTRADIQYS
     VSVLAGKMAK PTTTSMRWLV RVAGYLKRVP DLGFLIKPLV PDANLEYSGQ GKLVAGSTVV
     LESVSDADWG GCKRTRRSKS SAHFYLAGGL IASHVRTQKS IALSSGESEF VAMVSGATEL
     IFLKDCLGFM LKNKMTIEAK VRSDSAAAQG MAQRLGTGRV RHLACGMMWL QASVKSKMLK
     IGSISGSTNP ADLGTKVLAG PKVRQLLYYA GARLEDGTAY GQLEAEEAAQ RTRINQIVTN
     GVKKPSLKHV LPVLLVLSQI VGSDGASFEG LGLGVAMAGL EDTVAEVSYL ASAVLLRTSI
     LLVFPCGLAY VIWKLLGIFF RSGKGSTKEM AVQASMRSRA EQAWADEYTD KVNYLNQILA
     EERAEKEQME NALKKRFLED SVVGGALVDG RSTLRWLPWS TDEPAKPSGV VLVDGYGGTK
     AMLQEKAAAR GLLVAELWSP PHPKPAPKGP ALKDWLKKLP FSVSGVLAFS DPHALPIVEE
     VLSLVGLTGS GDVAADALLE QARRNKHLMQ VVLKDAGLTS CKWVLACSES EVRTFVEAEL
     SQKAVMKPFL GGSAGNNVTL LDYGNRPVES EALVRQVFRS RPAGAEFMSV LVQEHLAGDE
     YAVDIVVRDG AMAVMGVFKY DVRALNGAEF VVFGVLIEPI QKGSPEEAVA TYAMESLAAL
     GMRNGPAHVE VKMTAENGPV LIEANCNRFT GLDMIFDVAE RAVGYTAIDA FLDAADDRVS
     AEEWRSRYPA LPSPNLRAYG GVAQMHARES GIYEGGDEEA AAEIMELDSV FKLESRDIAV
     GYPLVRPSDS DIVAAKWLEW DSEREQEMQQ EQEQDPEQVD FGKVVDDFVE EFYDQCWQGY
     RFVGKGNAVV TYVSRLPGTM EGNRCYVKVK IDQEEHAFDR ALSSFALNMD FPPDYRYDTT
     VGAEGLVGAG ASTAGGLSGA LFSGSSGGLS GVSAGRRGTR HSHGSFTHMP MDCAFPAAAD
     FANCTGEAAQ GPQEHRRCGG LQPPRALACN SESMCSVLRR PTHSPRESST QPLHFWLSHL
     LFVPRVSRDT SRRLYFMAGT MTTLKLLLAM WCGCQSATPP PGACTTGNSG LGLIQRSPAL
     KKFELDLASQ EPEFSPVDGG DGRACRGATT GDNKAEYFQI QSSDSIEGCK ALCEGTVGCV
     GIEFHTSGRC EVWTREGGIH ASIALSGYTC LKYGVDETVG AFLPVDGGIG RACRGANGND
     NNPAHYTIES GLTEMQCKKL CMDTSACVGI EHAGTRCEVW TRPGGIKASR PASGSKCFKL
     EFTKVEGSDN MACRGGSAND NNPSHYSIKT TASIDQCKET CRMSSACVGI EFINTRCEIW
     TRPQGIEAGF PLAGYTCLKY HGGLKPPAST KQQRDARFLI QATFGPTLAS INNFNVSYQT
     WIGQQMAMKP GYHREYYRKR VNPRPVRSAS SLRSGNLLSR CSPGSRWVNH VILKSDRYRK
     IKVRGNKIFI DDFFRSDVDP AYLGNGLRQP DTCTDIPPKD WEGKGYTCTN RRYWVDDNCI
     KDEVWVEEQY CQKSCFEENL AYDNMDCSPG WAGMDYEGYI CTVDGDATRA WVKLNTKESC
     EGSSTETYML NPGVWKANPD STMTQPLAFE VFKPGVLMLT EPPSKCNLGT IIRSSREKPN
     QFYMLEERLE LLENTLESPS ATGVSGGKCP TVARTFLNEH TCRLLPGCLP LGQDKLSVAL
     TTHNLAKFFT VGGRYVYEVS GLITTKTPCG KTSRWKKCSS GCIATSGLSD SDIDKIADAL
     QAASEEGDVR DIDVSCSNVD AESIVAVGSD LFQHVHKDEG SVYDFTDWVL QHPGGAAKIK
     QFTGMGYKLI YPSWHPMERW DASFATQVIQ PQYVGKFGSH VQYHNLPATL QTEEIAQALG
     AASEATEYSA VCGSPQEVAN DPDMGHLLSF KHGGSDDIYF DQEYHFWWNR DRRAKQMIWT
     MHALYADDQL RQRMAWALSQ IYVASVSGLG YSERVEVWVN FYDIFVRNAF GNLRDVLQQV
     TYSPVMGSYL TYKGNRAFDE TGRFPDENYA REVMQLFSIG LWKLNPDGTQ MLDSSGQPIP
     TYDNEAIMDF ARVFTGFNDQ PNRGNYEHLD GRNWIDPMRM TARHHDKYPK PDLDGNYIGD
     GYPLCSDAAD QAFLVKGAKF SFVGASKHLD PDHKEGALVL DSSSGLYQAL CFESGGKCNY
     NLTVELDQTI PCTGKECTTV TVQLLNVSGG LYEYLQPTCV NMFFFNGRIT RDSGRRWGWS
     QKCRDPESLL AGIACCDGCK NRTDNWMRNR GYTCENAETT YPNMFTSRCN NSDWWSNSKY
     CQLACWQKGV GYEGDDCSFG PWHAERVCNY NWERVRLSTA EAVCAAKGMK LCNEKLEGYG
     CNYDSMQVWT QEPCSYEVIV SDEGKVASNF TSKTRNNWIK AVWKNGYPKM QNGQCPSGCT
     PFGSACSCSM TVEVRAVFTS TPTPSQIQQL KIGAFPPTTP CSTSCSGPVK AYQKDGKFDE
     FTVFEYMGSF YSNKESVVVL PGFELRNPPN FMPHVYMSEH HHPKHALAEV EALLDHLFKH
     PNVAPFISYR LIQRFGTSNP SPAYVHGVAD AFRKGSYGGK TYSGKYGDLG ATVAAILLHP
     EARNPTLASD GSLREPFLKL IHIMRALEYK DDLGSMPALR ELRDRIGQQP YRQPSVFSYY
     LPDFKPDNFP EGKVGPEFQI FTPPAIIDFL NGVNSLVDRG LGDCDRGFGE WAPGCSAGKL
     TLGQRDCLQP TVDQLDLLLT GGRLHNPQFI RAAYEEANGE DRYEVATQAV LLSPEFNTIG
     TPMPMGPRPP QPPKPVEVPG EYKATVMVFL NGGADSFNML VPINCPLNDE YKQVRGNVAL
     NNNELHAINV ANQDCAEFGI HHELKTFKEL YDLEELAFTA NVGSLVESLD KASYSSGMGQ
     RCVGLFSHSD QQRAAQTLTC QSATSAMRGA GGRLADALAS GSKKLKTMSF SLVGSQPWPQ
     GIETNAEIIS NGEPVQLRKK KQLQVIIDNI TSVKHGNIYA EEYSTRLTAA LDFNEQLTRS
     LRNAELATSF STDNRGFTRQ LREVARLIAS RTERGVDRDL FFVQLGGFDT HSSVERNLER
     RFDELDHGFQ RFVAEMKEQN MFDKIVMATH SDFARTLTPN SGAGTDHAWA GNYVIVGGGI
     KGGNVFNQFP KSLLPGAEQD AGRGRLIPKY PFENMMLPIA QWMGLETSQE TMVFPNLNNF
     NSSHFISEST LFK
//
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